Caenorhabditis elegans (nematode): CELE_F56A8.6
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Entry
CELE_F56A8.6 CDS
T00019
Symbol
cpf-2
Name
(RefSeq) RRM domain-containing protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CELE_F56A8.6 (cpf-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_F56A8.6 (cpf-2)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CELE_F56A8.6 (cpf-2)
U7-dependent histone pre-mRNA processing factors
CELE_F56A8.6 (cpf-2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_occluded
RRM_7
RRM_5
HSCB_C
Motif
Other DBs
NCBI-GeneID:
176742
NCBI-ProteinID:
NP_499734
WormBase:
WBGene00000774
Ensembl:
WBGene00000774
UniProt:
O45577
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Position
III:complement(13266932..13268883)
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AA seq
336 aa
AA seq
DB search
MMSGGYKSSGVGNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKG
YGFIEFPDIQTAEVAIRNLNGYELSGRILRVDSAAGGMNMEEFGSSSNAPAPVEENPYGP
ECDAGKAPERISQTVASLAPEKMFELMKQLQESLKNNPSELHKFLVEHPQIAYAVLQAAV
VMRIVDPQTALGLLHRNKAATLTPFHNTPQGAPPMVQQQQMPMPPKPTFAHPGPSMGPPM
GPPMGPPMGHPQAPQYGQNYGQPVAPQQYKPPPQQQPPVQMRPPVQQPQQNHQEEQQNAE
LLMQVMQLSEHDLQMLPAGDREKIIELRQQLKRNVK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgggggatacaaatcatccggagtgggcaatgatcgatctcaacgttcagtt
ttcgttggaaacattagctacgatgtatccgaagacacgattcgctccattttttcaaag
gcaggaaatgtgttgtcgatcaaaatggttcacgatcgggagaccggaaagccaaaggga
tacggatttattgaatttccagacattcaaaccgccgaagttgcaattcgaaaccttaat
ggttacgagctgagtggacgtattttgcgagtcgacagtgctgctggtggaatgaatatg
gaagaattcggctcatcgagtaatgctccagctcctgtcgaagagaatccgtatggtcca
gagtgtgatgctggaaaagcaccggagagaatctcccaaacagtcgcctccctggctccg
gagaaaatgttcgaactaatgaagcaactgcaagaatcgctgaagaacaatccatcggaa
ctacacaaattcctggtcgagcatccacaaatcgcctacgcggtgctccaagccgccgtt
gtcatgcgaatcgttgatccacagactgcacttggactccttcatcgtaataaggccgcc
acgctgacaccattccataatacacctcaaggagcaccgccaatggttcagcaacaacag
atgccgatgccaccgaagccaacatttgctcatcctggcccatctatgggtcctccgatg
ggaccacctatgggtccacctatgggacatccgcaagctcctcaatacggtcaaaattac
gggcaaccagtggctccacagcagtacaagccaccgccacagcagcagccaccagttcag
atgagacctccagttcagcagccacaacaaaatcatcaagaagagcagcaaaatgcggag
cttctgatgcaagtcatgcagctcagcgagcacgatcttcagatgcttcctgctggggat
cgtgagaagataatagagctgagacagcagttgaagagaaatgtcaagtaa
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integrated database retrieval system
