Caenorhabditis elegans (nematode): CELE_F31D4.1
Help
Entry
CELE_F31D4.1 CDS
T00019
Symbol
exos-7
Name
(RefSeq) Exoribonuclease phosphorolytic domain-containing protein
KO
K12589
exosome complex component RRP42
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CELE_F31D4.1 (exos-7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_F31D4.1 (exos-7)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CELE_F31D4.1 (exos-7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
CELE_F31D4.1 (exos-7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
180369
NCBI-ProteinID:
NP_001370048
WormBase:
WBGene00009289
Ensembl:
WBGene00009289
LinkDB
All DBs
Position
V:20838865..20841582
Genome browser
AA seq
312 aa
AA seq
DB search
MEVHLSDDEKLFLITGAEANIRNDGRSCQDFRQIILERGVLSGTNGSCRVQLGQTTDVLA
GIKLELESYDAETEKEPKQPINFNVDFSANASSQFAGKGGDEYAEELSAAFQAAYSKALD
IMPNLAKTQLADGYRWKINVDISVLQWDGSVSDAISIAIIGALSDLEFPEGDVAPDDGGK
VRIVLKRPKVAGNVRDENVQVAMWKLDVMRCPLLLTISKIGTANLVDCTPEEECCIRSQL
LVGLAAIADSSENNEPNYDVTCVKQVGGGLLEMESIQEMLELAAKSVGGLYGALAKRLKN
EEMRKPGHSFLL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaagtccatcttagcgacgacgagaagttatttctgattactggagccgaagcgaac
attcggaatgatggacgaagttgtcaggatttcagacagattattctcgagagaggtgtt
ctgtcgggaacgaatggaagttgtcgtgttcaattaggacagactaccgacgttttggct
ggaatcaaactcgaactagaatcatacgatgctgaaacagaaaaagagccaaaacaacca
attaatttcaacgtggatttctcagccaacgcgagcagtcaattcgctggaaaaggaggc
gacgaatacgcagaggaactatcggcagcatttcaagcggcttattcaaaagcactcgat
attatgccgaatctcgcgaaaactcagctggccgacggatatcgctggaaaattaatgtg
gacatttcggttcttcagtgggacggaagtgtttccgatgcgatttctattgcaatcatc
ggagcattgagtgatttagagtttccagaaggtgacgttgcaccagatgatggaggaaaa
gtgagaattgtgttgaaacggccgaaagttgctggaaatgttcgagatgagaatgtgcaa
gttgcaatgtggaaattggatgtgatgagatgtccactgctgctgacaatctcaaaaatt
ggcactgctaatcttgtcgactgcacacccgaagaagaatgctgcattcgatctcaattg
ctcgttggattggcggcgattgcagactcttctgaaaataacgagccaaattatgatgta
acgtgtgtgaaacaagttggcggtggacttttggagatggaatcgattcaggaaatgctg
gaattggctgcgaaatctgttggtggattgtatggagctctggcaaaacgattgaaaaat
gaagaaatgaggaaaccgggacactctttcttgctctaa
DBGET
integrated database retrieval system