Caenorhabditis elegans (nematode): CELE_Y111B2A.22
Help
Entry
CELE_Y111B2A.22 CDS
T00019
Symbol
ssl-1
Name
(RefSeq) Helicase ssl-1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CELE_Y111B2A.22 (ssl-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_Y111B2A.22 (ssl-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
CELE_Y111B2A.22 (ssl-1)
SWR1 complex
CELE_Y111B2A.22 (ssl-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
AAA_14
Motif
Other DBs
NCBI-GeneID:
190954
NCBI-ProteinID:
NP_001255179
WormBase:
WBGene00007027
UniProt:
Q9NEL2
LinkDB
All DBs
Position
III:<12714566..>12744721
Genome browser
AA seq
2395 aa
AA seq
DB search
MPATPVRASSTRISRRTSSRSVADDQPSTSSAVAPPPSPIAIETDEDAVVEEEKKKKKTS
DDLEIITPRTPVDRRIPYICSILLTENRSIRDKLVLSSGPVRQEDHEEQIARAQRIQPVV
DQIQRVEQIILNGSVEDILKDPRFAVMADLTKEPPPTPAPPPPIQKTMQPIEVKIEDSEG
SNTAQPSVLPSCGGGETNVERAAKREAHVLARIAELRKNGLWSNSRLPKCVEPERNKTHW
DYLLEEVKWMAVDFRTETNTKRKIAKVIAHAIAKQHRDKQIEIERAAEREIKEKRKMCAG
IAKMVRDFWSSTDKVVDIRAKEVLESRLRKARNKHLMFVIGQVDEMSNIVQEGLVSSSKS
PSIASDRDDKDEEFKAPGSDSESDDEQTIANAEKSQKKEDVRQEVDALQNEATVDMDDFL
YTLPPEYLKAYGLTQEDLEEMKREKLEEQKARKEACGDNEEKMEIDESPSSDAQKPSTSS
SDLTAEQLQDPTAEDGNGDGHGVLENVDYVKLNSQDSDERQQELANIAEEALKFQPKGYT
LETTQVKTPVPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHM
ACSESIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKGWMKPNCFHV
CITSYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQN
SLMELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRR
LKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRSTKENLKSGNMMSVLNIVMQLRKC
CNHPNLFEPRPVVAPFVVEKLQLDVPARLFEISQQDPSSSSASQIPEIFNLSKIGYQSSV
RSAKPLIEELEAMSTYPEPRAPEVGGFRFNRTAFVAKNPHTEESEDEGVMRSRVLPKPIN
GTAQPLQNGNSIPQNAPNRPQTSCIRSKTVVNTVPLTISTDRSGFHFNMANVGRGVVRLD
DSARMSPPLKRQKLTGTATNWSDYVPRHVVEKMEESRKNQLEIVRRRFEMIRAPIIPLEM
VALVREEIIAEFPRLAVEEDEVVQERLLEYCELLVQRFGMYVEPVLTDAWQCRPSSSGLP
SYIRNNLSNIELNSRSLLLNTSTNFDTRMSISRALQFPELRLIEYDCGKLQTLAVLLRQL
YLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFI
LSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEEN
ILRKATQKRRLGELAIDEAGFTPEFFKQSDSIRDLFDGENVEVTAVADVATTMSEKEMEV
AMAKCEDEADVNAAKIAVAEANVDNAEFDEKSLPPMSNLQGDEEADEKYMELIQQLKPIE
RYAINFLETQYKPEFEEECKEAEALIDQKREEWDKNLNDTAVIDLDDSDSLLLNDPSTSA
DFYQSSSLLDEIKFYDELDDIMPIWLPPSPPDSDADFDLRMEDDCLDLMYEIEQMNEARL
PQVCHEMRRPLAEKQQKQNTLNAFNDILSAKEKESVYDAVNKCLQMPQSEAITAESAASP
AYTEHSSFSMDDTSQDAKIEPSLTENQQPTTTATTTTTVPQQQQQQQQQKSSKKKRNDNR
TAQNRTAENGVKRATTPPPSWREEPDYDGAEWNIVEDYALLQAVQVEFANAHLVEKSANE
GMVLNWEFVSNAVNKQTRFFRSARQCSIRYQMFVRPKELGQLVASDPISKKTMKVDLSHT
ELSHLRKGRMTTESQYAHDYGILTDKKHVNRFKSVRVAATRRPVQFWRGPKALESRNLQS
LNGGMPPRHESRLAEFDVKTNIRLDAEDIVTMSDESIVAYEASKKKLLASRQTKPSPRQD
VRFHTLVLRPYTVPVTTEYSAAPSRREMRIAVPPLQPSALSTISSVAAAATSGPLPSIQH
LQSSSTGLGSQQNLQNSHNSEQRNNVQNMHQNQYNSSQNPPIPIRQIGAASSHQHDQGSQ
GPGGKPQAYHLVQQGSQQQQQQQQQATLQRRNAAAAAGSNVQFIQQQQQQQQSGKNCGQG
QSFVVMGSQSSSNDGQGGASTVGGGGGGSQQPHQQQQQQPQQRIQYIPQVTGSGNNGGGG
GRGGYGSTLVMPRGGRVVRPAGTLPGGGRLYVDHNRHPYPMSSNVVPVRVLPATQQGQQR
MMTGQRRPAPAPGTVAAMVLPNRGAGGIPQMRSLQRGSYTGGGGQQRINVMVQPQQMRSN
NGGGVGGQGGLQGGPGGPQGIRRPLVGRPLQRGVDNQAPTVAQVVVAPPQGMQQASQGPP
VLHMQRAVSMQMPTSHHHQGQQQAPPQSSQQASQQAPTSDSGTSAPPRQAPPPQN
NT seq
7188 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaacaccggtgcgtgcttcaagtactcgaataagcagacgtacatcatcaaga
tcagtggctgatgatcagccatcaacttcgtctgcggtggctccacctccttcacccatt
gccatagaaactgatgaagatgcggtagttgaggaggagaaaaagaagaaaaagacatca
gatgatttggaaattatcactccaagaactccagtcgatcggcgaattccctacatttgc
tcgattcttttgactgaaaatcgatcgattcgcgataaattggttctgagcagcggtcca
gttcgtcaagaagatcacgaagaacagattgctcgagctcaacggatacagccagttgtc
gatcaaattcaacgagtcgagcaaatcatactcaatggttcagtggaagatattctgaaa
gatcctcgattcgcagtaatggcagatctcacaaaagaaccaccaccaacacctgcacct
cctcctccaatccagaagacaatgcaaccgattgaggtgaaaattgaggattcagagggc
tcaaatacggctcaaccgagtgttctgcccagttgtggaggaggagagacgaatgtggaa
agagccgccaaaagagaagcgcatgtattggctcgaatcgccgagctccgtaagaacggc
ttatggtcgaacagtcgtctgccaaagtgcgtcgaacctgaacgtaataaaacgcattgg
gattatctactggaagaggtcaaatggatggcagttgatttccgaaccgagacgaatacg
aagcgaaaaatcgccaaagttatagctcacgccattgcgaaacagcaccgcgacaagcag
atcgagattgagagagccgccgaacgggagatcaaggagaagcgaaaaatgtgtgcagga
atcgcgaagatggtacgggatttctggtcgtctacggataaagttgtggatattcgagcg
aaggaagttctggagtcgaggctcaggaaggcgagaaataagcatttgatgtttgtaatt
ggacaagtcgatgaaatgagcaatattgtgcaagaaggacttgtttcatcgtcgaaatcc
ccatcaattgcatcggatcgagatgataaagatgaagaattcaaagcacctggctctgat
tcagaatctgacgatgagcagacaattgcaaacgcggaaaagtcacagaaaaaggaagat
gttcgacaggaagttgatgctcttcaaaacgaggcaactgtggatatggatgactttttg
tacactttaccgccggaatatctgaaggcttatggtctgacgcaggaggatttggaggag
atgaagcgcgagaaattggaggagcagaaggctcggaaggaagcttgtggtgataatgag
gagaaaatggagattgatgaaagcccatcatcagatgctcaaaagccttccacctcaagc
tcagatctcaccgccgagcagcttcaagatccaacagctgaagacggcaacggtgatggt
catggtgtacttgaaaacgtggattacgtgaagctcaacagtcaggatagtgatgaacga
caacaagagttggcgaatatcgcagaagaagcgctgaaattccagccaaaaggatataca
cttgagacgacacaagtcaagacgcccgtaccattcctgattcgaggacaactgagagaa
tatcaaatggttggattggattggatggttacactttatgagaagaatttgaatggaatt
cttgccgacgagatgggcctgggaaagacgattcaaacgatttccctgctggctcatatg
gcttgtagtgaatcgatttggggaccacacttgattgttgtgccgacgtctgtcattctg
aattgggagatggagttcaagaaatggtgtccggctctgaagattttgacgtattttggt
acggcgaaggagcgtgccgagaagcggaagggatggatgaagccgaattgtttccatgtg
tgcatcacatcatacaagacggttactcaagatattagagcttttaagcagagggcctgg
cagtacctaattctcgatgaagctcaaaatatcaaaaactggaagtcccaacgttggcag
gctcttctgaatgtccgtgctcgacgtcgccttctcctgaccggaactccacttcagaac
tctctaatggaactgtggtcgttgatgcattttttgatgccaacaatattctcaagtcat
gatgatttcaaggattggttctcgaatccgttgacagggatgatggaaggaaatatggaa
ttcaatgctccactaatcggacgacttcacaaagtgctccgtccgtttattctgcggcgg
ctcaagaaggaagttgagaagcagctgccagagaagactgagcatattgtgaattgttcg
ttgtcaaagcggcagagatacctgtacgatgactttatgagtcgtagatcaacaaaggag
aatctaaagtctggaaatatgatgtcggtgctcaacattgtgatgcaactccgaaaatgt
tgtaatcatccgaatctcttcgagccgcggccagttgttgctccgttcgtcgttgagaag
cttcagctcgatgttccggctcgtctctttgaaatttcgcagcaagatccctcctcctcc
tcagctagtcaaattccggaaattttcaatttatccaaaatcggctatcaatcttccgtt
cgatctgcaaaaccactcatcgaagagcttgaagcaatgagcacttatccggagccacga
gcaccagaagttggcggatttcggttcaatcggacggcttttgttgcaaagaatccgcat
acggaagagtcggaggacgaaggtgttatgagaagtcgtgttctgccaaaaccaattaat
ggaacagctcaaccacttcaaaatggaaattcaataccacaaaatgctccaaatcgtcca
caaacttcatgcattcgttcaaaaaccgtcgtaaatacagttccactgaccatctccacc
gatcgaagtggttttcattttaatatggccaatgttggaagaggtgttgttcgtttggat
gattcagcacgtatgagcccaccgctcaaacgtcagaagctcaccggaactgcaacgaat
tggagtgattatgttccgcgacacgttgttgaaaagatggaagaatcgagaaaaaaccag
ctggaaattgttcgaaggcgatttgagatgattcgtgctccgattattccactggaaatg
gttgcgctggttcgagaggaaattattgcagaatttccacgtttggctgtggaagaggac
gaggttgtgcaggagaggcttttggagtattgcgagttgttggtgcaaagattcggaatg
tacgtcgaaccagtgctgaccgatgcttggcagtgtcgtccatcatcgtctggtcttcca
tcatatattcgcaacaatttatcaaatatcgagctgaattctcgttctcttctcctcaac
acctccactaatttcgatacccgaatgtcgatctcacgtgctcttcaattcccagaactc
cgtctgatcgagtacgattgtggaaagcttcagacgttggctgttctgcttcgtcagttg
tacctgtacaagcacagatgtctgatcttcacgcaaatgtcaaagatgctcgacgttctg
cagaccttcctttctcatcacggttatcagtatttccgcctcgacggtaccactggtgtc
gaacaaagacaggcgatgatggagcggttcaacgcggatcccaaggtgttttgcttcatt
ctgtcgacgagatccggtggtgttggagtcaatctaaccggtgctgacactgtgatcttc
tacgattcggattggaatccgacgatggatgctcaggctcaggatagatgtcatcgtatc
ggacagacgaggaatgtctcgatttatcgattgatttccgagcgaacaattgaggagaat
attctgagaaaggcaacacagaagcggcgacttggagagttggcaattgacgaggctggc
ttcacacccgagttcttcaaacaatctgacagtattcgggatctttttgatggagagaat
gtggaagtgactgctgtggcagatgttgcgacgacgatgagcgagaaagaaatggaggtt
gcgatggcaaagtgtgaagatgaagctgatgtgaatgcggcgaagattgcggtggccgag
gcgaacgttgataatgcggagtttgatgagaaatcattgccgccgatgagcaatttgcaa
ggagatgaggaggctgatgagaagtatatggagttgatacaacagctcaaaccaatcgaa
cgatatgccattaactttcttgagacacagtacaagccagaatttgaggaagaatgcaaa
gaggcagaggctcttatcgaccaaaaacgcgaagaatgggacaaaaatctcaacgatacc
gccgtcattgacctcgacgattcggatagtctgctgctcaacgatccttcgacttctgcc
gatttttatcagagctcaagtcttttagacgagataaaattctacgacgagctggacgat
atcatgccaatctggcttccaccatcaccaccagattcggatgcggatttcgacttgaga
atggaagatgattgtctcgatctgatgtatgaaattgaacaaatgaacgaggctcgccta
ccacaagtttgtcatgaaatgagacgtccgttggctgaaaaacagcagaaacagaacacg
ttgaatgcgtttaatgacattctatcggcaaaagaaaaggaatcggtgtacgatgcggtc
aacaagtgccttcaaatgccacaatccgaagcgatcacagcagaatctgcagcgtctcca
gcatacacggaacactcatcattctcgatggatgatacaagccaggatgcgaagattgag
ccaagtttgactgaaaatcaacaacccaccaccaccgccactactactactacagtaccc
caacaacaacaacaacagcagcagcaaaaatcgtcgaaaaagaagagaaatgataatcga
acggctcaaaatcgaacagctgaaaatggtgtgaaacgagcgacaactccaccaccatca
tggcgtgaagagccagattatgatggagccgaatggaatatagttgaagattatgcacta
cttcaagcagttcaagtcgaatttgcaaatgctcatttagtcgaaaaatcggcgaatgag
ggaatggtgttgaactgggaattcgtgtcgaatgccgttaataagcagacaagatttttc
cgctcggcccgtcaatgctcaattcgatatcaaatgtttgttcggccaaaagagctcgga
cagttggtggcttctgatccgatttccaagaaaacgatgaaagtcgacctatcgcatact
gaattatctcatttgagaaaaggacgaatgactacggagagccaatatgctcatgattat
ggaatattgactgataagaaacatgtgaatagatttaaaagtgttcgagtggcggcaaca
cggagacctgttcagttttggagaggccctaaagctctagaatctcgaaatctgcaatct
ctaaacggcggaatgccaccacgacacgagtcgagactcgccgaattcgacgtaaaaacc
aatattcgcctggacgccgaggacattgtcacaatgtccgacgagtcgattgtcgcctat
gaagcgagcaagaagaagctactggccagtcgtcaaacaaaaccctcaccacgtcaagat
gtccgattccatacgctggttcttcggccgtataccgtacctgtgacaactgagtactcg
gctgcaccttctcgtcgtgaaatgcgcatcgctgttccaccgcttcagccttcggcttta
tctacgatttcctcagttgctgctgctgccacgtctgggccactaccatcaattcagcat
ttgcagtcgtcgtctacgggcttgggatctcagcaaaatttgcaaaattcgcataattct
gagcaaagaaataatgtgcaaaatatgcatcaaaatcaatataattcaagtcaaaatccg
ccaatacctatccgacaaatcggagcagcatcatcacaccaacatgatcaaggatctcag
gggcctgggggaaaaccacaagcctatcacctggtgcaacagggatcacagcaacagcag
cagcagcagcagcaggcgacgttacagcgaagaaatgcggcggcggcggcagggtcgaat
gtgcagtttattcagcagcagcagcagcagcagcaatcgggtaaaaattgcggtcaagga
caaagcttcgttgtcatgggctcgcagagctcatcaaatgatggacaaggtggagcatcg
accgtcggaggaggaggaggaggatcacaacagcctcaccagcagcagcagcagcagcca
caacaaagaatacagtacattccacaagttaccggtagcggaaataacggtggaggtggt
ggaagaggaggctacggtagtacactggtcatgccaagaggaggacgtgttgtcaggcca
gcgggaactctaccaggcggtggacgtctgtatgtcgatcataaccgtcatccatatcca
atgtcgtcaaatgttgtgccagtacgtgttctaccagccacgcaacaaggacaacaacga
atgatgacaggacaacgtcgtccggctccagcgcccggtactgtcgccgcaatggtgttg
ccgaatcgaggagctggtggaattccgcaaatgcgcagtttgcaacgaggcagttacacc
ggcggtggtggtcagcaacgaatcaacgtgatggttcaaccacaacaaatgcgcagcaac
aatggcggtggagtcggtggccaaggaggcctccagggtggtccaggaggtccgcaagga
attcgtcggccactcgtcggacggccactacaacgaggagtcgataatcaggcgccgacg
gttgctcaggtcgttgttgctccgccgcaaggaatgcagcaggcatcacaaggaccaccc
gtacttcatatgcagagagcggtttccatgcaaatgccgacgagtcatcatcatcaaggc
caacagcaggctcctccgcagagctcacagcaggcttcgcaacaggctcccacatcggat
tctgggacgagtgctccgccacgacaagcaccaccaccacaaaactag
DBGET
integrated database retrieval system
