Caenorhabditis elegans (nematode): CELE_W04C9.1
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Entry
CELE_W04C9.1 CDS
T00019
Symbol
haf-4
Name
(RefSeq) ABC-type antigen peptide transporter
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel02010
ABC transporters
cel04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CELE_W04C9.1 (haf-4)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CELE_W04C9.1 (haf-4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cel02000
]
CELE_W04C9.1 (haf-4)
Transporters [BR:
cel02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
CELE_W04C9.1 (haf-4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
ABC_ATPase
RsgA_GTPase
nSTAND1
Motif
Other DBs
NCBI-GeneID:
171639
NCBI-ProteinID:
NP_001021666
WormBase:
WBGene00001814
Ensembl:
WBGene00001814
UniProt:
Q9TZD9
LinkDB
All DBs
Position
I:<489969..>496158
Genome browser
AA seq
787 aa
AA seq
DB search
MNSTVASRFSWGLILASIDFLACLLFACLHDGTFKFANFTSQFGDFSFFTSTIDLFLLQF
FRFALWMVPAAIHVANKADTLTMWKEPIFCSALLICAASPTKLLLLTEKLKPDEFLTFGD
TAFLVWNFISAIILNSSWTRYFSRTPSSYIILEDEDLEVAPKQTFELIFRLLQYCKREWL
WHISGFSWLFIYSITRIFVPYYTGQVIATVVATKSYPALSNAVYIMTIISLVSAVAAGFR
GGSFEYAYARIQRAIRYDLFHGLVKQDVAFYDAHKTGEVTSRLAADCQTMSDTVALNVNV
FLRNCVMLLGSMIFMMKLSWRLSLVTFILVPIIFVASKIFGTYYDLLSERTQDTIAESND
VAEEVLSTMRTVRSFSCENVEADRFYGKLTHTLDVTRTKAIAYIGFLWVSELFQSFIIVS
VLWYGGHLVLTQKMKGDLLVSFLLYQMQLGDNLRQMGEVWTGLMQSVGASRKVFEYIDRE
PQIQHNGEYMPENVVGKIEFRNVHFSYPTRSDQPILKDLSFTVEPGETVALVGPSGSGKS
SCISLLENFYVPNAGQVLVDGVPLEEFEHHYIHKKIALVGQEPVLFARSVMENVRYGVEV
ADTEIIRSCEMANAHGFIMQTTLKYETNVGEKGTQMSGGQKQRIAIARALVREPAILLLD
EATSALDTESEHLVQEAIYKNLDGKSVILIAHRLSTVEKADKIVVINKGRVEQIGNHETL
LKDTNGTYAKLVQRQMMGDQKPRKRPAVARSGPQPAASINVAGPSQGNAMSLLSTSFSQS
ASSVTSH
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgacggtggcttcccgtttctcatggggactcattctggcgtcgatcgatttt
ttggcgtgcctactgttcgcctgcctgcatgatggaactttcaaattcgcgaattttact
tcgcaatttggcgatttttcgttttttacgagcacaatcgacctattcttgctgcaattt
ttccgttttgcactatggatggtgccggcggcaatccacgtggccaacaaggcggacacg
ttgacaatgtggaaagagccaattttctgctcggcactgctcatctgcgcggcgagcccc
acaaaattgctcctcctcacagaaaagctgaagcccgatgagttcctcactttcggcgac
actgccttccttgtctggaatttcatttccgcgatcattttgaactcctcgtggacaaga
tacttctcgcgaactccgtcttcatatataattctggaggatgaggatctcgaggtggct
ccaaaacaaacgtttgagcttattttccgcctgctccaatactgcaaacgtgaatggctc
tggcatatttccggattctcgtggctctttatttattcgatcacccgtatcttcgttccc
tattacacgggacaagtcatcgctaccgtggtcgccacaaaatcgtacccagccctctcc
aacgctgtctacatcatgacaatcatctcgttggtgagcgctgtcgccgccggattccgt
ggaggatccttcgagtacgcctacgcaaggatccagagggcaatccgctacgatttgttc
cacggactcgtgaaacaggatgtcgctttctatgatgctcacaagaccggagaggtgact
tctcgtctggctgctgattgtcagactatgtcggatacagttgcgttgaatgttaacgtt
ttcctcagaaactgcgttatgctccttggatcgatgatcttcatgatgaagctttcgtgg
cgcctctccctcgtcacattcatcctcgtcccaattatcttcgtcgcctccaaaatcttc
ggaacatattatgatctcctctccgaaagaacacaggacacaattgccgagtccaatgac
gttgccgaggaagttctctccacaatgcgtacagtccgatccttttcctgcgagaacgtc
gaagccgatcgcttctacgggaagctcacccacacacttgatgtcaccagaaccaaggcg
atcgcctatatcggattcctctgggtctccgaacttttccagtcgttcatcattgtgtca
gtcctctggtatggaggccatctagtgctcacccagaaaatgaagggagatcttctagtg
tcatttttgttgtatcaaatgcaactcggagataatcttcgtcaaatgggagaagtctgg
acaggattgatgcaatctgttggagcaagtcgtaaagtgttcgagtacattgatcgagag
ccccagattcagcacaacggggagtatatgccggagaatgttgttggaaagatcgagttc
agaaatgttcacttcagttatccaactcgttccgatcagccaatccttaaggatctctcg
tttaccgttgaaccaggagagactgtcgcattggttggaccatctggctctggaaagtct
tcgtgcatttctttgcttgagaacttctacgtcccgaatgctggacaggttttggtggat
ggagttccgttggaagaattcgagcatcattatattcataagaagatcgcccttgtcggc
caggagcccgtcctgttcgctcgttctgtgatggaaaatgtcagatacggtgtcgaagtg
gcggatacggaaatcattcgctcttgtgaaatggcgaatgctcacggattcattatgcaa
accacgttgaaatacgaaacaaacgtcggagagaagggaacacaaatgtccggtggtcag
aagcaacgtatcgcaattgctcgtgctcttgttcgtgagccagcgattctcttgttggat
gaagccacgtcggcgttggacaccgagtccgaacatcttgttcaggaagcgatttataag
aatttggatggaaagagtgtcattttgattgcacatcgattatcgactgttgagaaggct
gataagattgtggttattaataagggaagagtcgaacaaatcggaaatcacgaaacccta
ctgaaggacaccaacggaacctacgcgaagctcgttcaacgccaaatgatgggagatcag
aagccacgtaaacggccggcggtcgccagatcgggacctcagccagccgcgtcaatcaac
gtggcaggaccatcgcagggtaatgcaatgtccctgttgtcgacgtctttcagccaatct
gccagtagtgttacttctcattaa
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