Caenorhabditis elegans (nematode): CELE_F12F6.7
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Entry
CELE_F12F6.7 CDS
T00019
Symbol
F12F6.7
Name
(RefSeq) putative DNA polymerase delta small subunit
KO
K02328
DNA polymerase delta subunit 2
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03030
DNA replication
cel03410
Base excision repair
cel03420
Nucleotide excision repair
cel03430
Mismatch repair
cel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CELE_F12F6.7 (F12F6.7)
03410 Base excision repair
CELE_F12F6.7 (F12F6.7)
03420 Nucleotide excision repair
CELE_F12F6.7 (F12F6.7)
03430 Mismatch repair
CELE_F12F6.7 (F12F6.7)
03440 Homologous recombination
CELE_F12F6.7 (F12F6.7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cel03032
]
CELE_F12F6.7 (F12F6.7)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_F12F6.7 (F12F6.7)
DNA replication proteins [BR:
cel03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
CELE_F12F6.7 (F12F6.7)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
CELE_F12F6.7 (F12F6.7)
MMR (mismatch excision repair)
DNA polymerase delta complex
CELE_F12F6.7 (F12F6.7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
PLDc
Motif
Other DBs
NCBI-GeneID:
178077
NCBI-ProteinID:
NP_502177
WormBase:
WBGene00008722
Ensembl:
WBGene00008722
UniProt:
Q19366
LinkDB
All DBs
Position
IV:complement(11558737..11561833)
Genome browser
AA seq
451 aa
AA seq
DB search
METAWSNILNYKNVSDRYILTEKDKKGAFTRQYFEVYEARLKELKPRILENAEREIGKGK
FTHSQLSDAKQDEEIFVVGVIVKRIAARPSILKSLLNEDKVAYDDYEEDAEEDEVKRYAG
SIEDRIELESDKQTVRLEGNISMDECATGCCVGVLGKLGKEGVFHVNRLVWPSVKVPKKV
AVDGTIAFVSGLDLTGDLEDDRLTISGLEFMADWMNVQVGNENQCPPIDRLVVIGPLVET
KSNGCDVQSVVRTLTLSRAEKHSSTASLITVDKIINSIAEKPLVNTVDVTPGVGDPCSSM
WPLPPIHRVCLPRCGMSDKKVNLVTNPYEFEVNGLRVMTMSGENVSELLRTSLKWTGADA
IENIIKWQHVAPNCPDTLDAFPVAERDPLIMDITPHVIICGNQPHAEFRHIPIDGSNCLV
VCLPKFSKTRVACFLNLSDLSLKWQNFDHQF
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgcttggtccaacatcctaaactataagaatgtctcagatcgatacattctc
actgaaaaagataaaaaaggtgcgttcactagacagtactttgaagtctacgaagctcgc
ttgaaggaactgaaacctcgtattttggaaaatgcagaacgtgaaattggcaagggaaaa
ttcacgcattcacaattgagcgatgctaaacaagacgaggaaatcttcgtggtcggcgtt
attgtaaagagaatagctgcaagaccatcaattttgaaatcgttgctcaacgaggataaa
gtggcttatgatgattatgaagaagatgccgaagaagacgaagtgaaaagatacgctgga
agcattgaagatcgaatcgaattggaatcagataaacagacagtacgtctggaaggaaat
atttcaatggatgagtgtgcaactggttgttgtgttggagttcttggaaaattaggaaaa
gaaggagtatttcatgtgaatcgtttggtttggccatctgtaaaagttccaaagaaagtg
gctgtcgacgggactatcgctttcgtcagtggactcgatctaactggagatttggaagac
gatcgactcacaatctctggtcttgaatttatggctgattggatgaatgttcaagttgga
aatgagaatcaatgtccaccgattgatcgtcttgtagttattggtccactggttgaaaca
aaatcaaatggttgtgatgttcagtcagtcgttcgaacacttactctttcacgtgcagag
aaacattcttcaacagcatcactaattactgtagacaaaattattaattcaattgctgaa
aaacctcttgttaacactgtcgacgtgactcctggtgttggtgatccatgctcatcgatg
tggccactgccacctattcacagagtttgtcttccacgttgtggaatgagtgataaaaaa
gtgaatcttgtgacaaatccatatgaatttgaagtcaatggactacgtgtgatgacaatg
tctggcgaaaacgtgagcgagcttcttcgtacttccctgaaatggacgggagctgatgct
attgagaatatcattaaatggcaacatgtggcaccaaattgtccagatactcttgatgca
ttcccagtggctgaaagagatcctctgatcatggacatcacaccgcatgtgatcatttgt
ggaaatcaacctcacgccgagttccgtcatattccaattgatggatcaaattgccttgtt
gtttgcctgcccaaattctccaaaactcgtgtcgcctgctttctcaacttatctgatctt
tccctgaagtggcaaaactttgatcatcagttctaa
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