Caenorhabditis elegans (nematode): CELE_Y77E11A.13
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Entry
CELE_Y77E11A.13 CDS
T00019
Symbol
npp-20
Name
(RefSeq) Protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03013
Nucleocytoplasmic transport
cel04141
Protein processing in endoplasmic reticulum
cel04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CELE_Y77E11A.13 (npp-20)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CELE_Y77E11A.13 (npp-20)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
CELE_Y77E11A.13 (npp-20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_Y77E11A.13 (npp-20)
04131 Membrane trafficking [BR:
cel04131
]
CELE_Y77E11A.13 (npp-20)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CELE_Y77E11A.13 (npp-20)
Membrane trafficking [BR:
cel04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
CELE_Y77E11A.13 (npp-20)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CELE_Y77E11A.13 (npp-20)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
CELE_Y77E11A.13 (npp-20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
YmzC
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
176957
NCBI-ProteinID:
NP_500086
WormBase:
WBGene00003806
Ensembl:
WBGene00003806
UniProt:
Q9N4A7
LinkDB
All DBs
Position
IV:complement(1490653..>1496022)
Genome browser
AA seq
313 aa
AA seq
DB search
MTTVRQRIDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAELVGHSGP
VWKVSWAHPKYGGLLASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAPHQYGLM
LASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDK
NVKIWAFDDATNEWILEKTLAGHTDFVREAAWCPVTNNGQHTIVSCGMEGNLVLFRTSNI
ETEEWKAKLLETAPCALYHSSFSPCGSFLSVAGDDNVITIWRENLQGQWIKVPRDNKERE
GMSQAVGAPGAQR
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggtccgccagagaatcgatacacaacatcgtgacgcaattcacgacgctcag
ctcaacatctacggaagccgactcgccacgtgtggatctgaccgtcttgtgaagattttt
gaggttcgcccaaatggccagtcatatccgatggcggagcttgtcggacacagtggtccc
gtttggaaagtctcatgggctcatccgaaatatggaggacttcttgcctccgcttcctat
gataaaaaagtgataatctggaacgaacaacaaggccgctggcaaaaagcctacgaatgg
gccgctcatgaggccagtacgacttgtgtggcctttgcaccacaccaatatggcctaatg
ttggcttctgcctctgctgacggtgatatcggtattcttcgatacgacaattcgagcaac
gaatggatttcgtcgaaaattcagaaatgtcatgaacaaggagttaattcagtgtgttgg
gcacctggaagtgctgatccggcggcaaaaaaacgtcttgtttcagctggaaatgataaa
aatgtcaagatttgggcttttgacgacgctacaaacgaatggattctcgagaaaacccta
gccggacacacagattttgtacgtgaagccgcatggtgcccggtaacaaataatggacaa
catacaattgttagctgtggaatggagggaaatttggtacttttccgtacttcaaatatt
gaaactgaagagtggaaggcgaaattattggagacggctccgtgtgcattgtaccattca
tcattttctccgtgtggatcattcctttcagttgctggcgatgataatgtgatcacaatt
tggcgcgaaaatcttcagggacaatggatcaaagtgccacgtgacaataaggaacgcgag
ggaatgagccaagcggtcggagctccgggagctcagagataa
DBGET
integrated database retrieval system