KEGG   Caenorhabditis elegans (nematode): CELE_Y77E11A.13
Entry
CELE_Y77E11A.13   CDS       T00019                                 
Symbol
npp-20
Name
(RefSeq) Protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03013  Nucleocytoplasmic transport
cel04141  Protein processing in endoplasmic reticulum
cel04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CELE_Y77E11A.13 (npp-20)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CELE_Y77E11A.13 (npp-20)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    CELE_Y77E11A.13 (npp-20)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_Y77E11A.13 (npp-20)
   04131 Membrane trafficking [BR:cel04131]
    CELE_Y77E11A.13 (npp-20)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CELE_Y77E11A.13 (npp-20)
Membrane trafficking [BR:cel04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    CELE_Y77E11A.13 (npp-20)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    CELE_Y77E11A.13 (npp-20)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    CELE_Y77E11A.13 (npp-20)
SSDB
Motif
Pfam: WD40 YmzC ANAPC4_WD40
Other DBs
NCBI-GeneID: 176957
NCBI-ProteinID: NP_500086
WormBase: WBGene00003806
Ensembl: WBGene00003806
UniProt: Q9N4A7
LinkDB
Position
IV:complement(1490653..>1496022)
AA seq 313 aa
MTTVRQRIDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAELVGHSGP
VWKVSWAHPKYGGLLASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAPHQYGLM
LASASADGDIGILRYDNSSNEWISSKIQKCHEQGVNSVCWAPGSADPAAKKRLVSAGNDK
NVKIWAFDDATNEWILEKTLAGHTDFVREAAWCPVTNNGQHTIVSCGMEGNLVLFRTSNI
ETEEWKAKLLETAPCALYHSSFSPCGSFLSVAGDDNVITIWRENLQGQWIKVPRDNKERE
GMSQAVGAPGAQR
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaccacggtccgccagagaatcgatacacaacatcgtgacgcaattcacgacgctcag
ctcaacatctacggaagccgactcgccacgtgtggatctgaccgtcttgtgaagattttt
gaggttcgcccaaatggccagtcatatccgatggcggagcttgtcggacacagtggtccc
gtttggaaagtctcatgggctcatccgaaatatggaggacttcttgcctccgcttcctat
gataaaaaagtgataatctggaacgaacaacaaggccgctggcaaaaagcctacgaatgg
gccgctcatgaggccagtacgacttgtgtggcctttgcaccacaccaatatggcctaatg
ttggcttctgcctctgctgacggtgatatcggtattcttcgatacgacaattcgagcaac
gaatggatttcgtcgaaaattcagaaatgtcatgaacaaggagttaattcagtgtgttgg
gcacctggaagtgctgatccggcggcaaaaaaacgtcttgtttcagctggaaatgataaa
aatgtcaagatttgggcttttgacgacgctacaaacgaatggattctcgagaaaacccta
gccggacacacagattttgtacgtgaagccgcatggtgcccggtaacaaataatggacaa
catacaattgttagctgtggaatggagggaaatttggtacttttccgtacttcaaatatt
gaaactgaagagtggaaggcgaaattattggagacggctccgtgtgcattgtaccattca
tcattttctccgtgtggatcattcctttcagttgctggcgatgataatgtgatcacaatt
tggcgcgaaaatcttcagggacaatggatcaaagtgccacgtgacaataaggaacgcgag
ggaatgagccaagcggtcggagctccgggagctcagagataa

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