Caenorhabditis elegans (nematode): CELE_F44B9.8
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Entry
CELE_F44B9.8 CDS
T00019
Symbol
F44B9.8
Name
(RefSeq) putative replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03030
DNA replication
cel03410
Base excision repair
cel03420
Nucleotide excision repair
cel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CELE_F44B9.8 (F44B9.8)
03410 Base excision repair
CELE_F44B9.8 (F44B9.8)
03420 Nucleotide excision repair
CELE_F44B9.8 (F44B9.8)
03430 Mismatch repair
CELE_F44B9.8 (F44B9.8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cel03032
]
CELE_F44B9.8 (F44B9.8)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_F44B9.8 (F44B9.8)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_F44B9.8 (F44B9.8)
DNA replication proteins [BR:
cel03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CELE_F44B9.8 (F44B9.8)
DNA Replication Termination Factors
ELG1-RFC complex
CELE_F44B9.8 (F44B9.8)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CELE_F44B9.8 (F44B9.8)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CELE_F44B9.8 (F44B9.8)
Check point factors
HRAD17(Rad24)-RFC complex
CELE_F44B9.8 (F44B9.8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RuvB_N
AAA_24
AAA_22
AAA_11
AAA_30
AAA_5
AAA_14
DNA_pol3_delta
AAA_19
AAA_16
DUF815
DEAD
AAA_2
AAA_7
SLFN-g3_helicase
ResIII
AAA_assoc_2
T2SSE
PhoH
AAA_3
ATPase_2
nSTAND3
Mg_chelatase
AAA_25
AAA_28
Thioredoxin_6
bpMoxR
ABC_tran
AAA_18
Motif
Other DBs
NCBI-GeneID:
176131
NCBI-ProteinID:
NP_498750
WormBase:
WBGene00018409
Ensembl:
WBGene00018409
UniProt:
P34429
LinkDB
All DBs
Position
III:complement(8028133..>8029649)
Genome browser
AA seq
368 aa
AA seq
DB search
MGSRTGSREEHSLQFLNLTKMTTTTASNLPWVEKYRPSKLDELVAHEQIVKTLTKFIENR
TLPHLLFYGPPGTGKTTTVLAAARQMYSPTKMASMVLELNASDERGIDVVRNTIVNFAQT
KGLQAFSTSSNTGTVPFKLVILDEADAMTKDAQNALRRVIEKYTDNVRFCIICNYLASIV
PAIQSRCTRFRFAPLDQKLIVPRLEYIVETEQLKMTPDGKDALLIVSKGDMRTVINTLQS
TAMSFDTVSENTVYQCIGQPTPKEMKEVVKTLLNDPSKKCMNTIQTKLFENGYALQDVIT
HLHDFVFTLDIPDEAMSAIITGLGEVEENLSTGCSNETQLAAVVAAFFEAKRLCVKEMKN
LEIEDMEF
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgggctctagaaccggttctcgagaagaacattctctgcaatttttgaatctaaccaaa
atgactacaacaacagcttcaaatttgccatgggtggagaaatatcgtccaagcaagttg
gacgaacttgtcgcacacgagcagattgtaaaaactttgacgaaatttattgaaaaccgc
acattgcctcatcttcttttctacggaccacctggaactggaaaaacgacgacggtgtta
gcagcagcgcgacaaatgtattccccgacgaaaatggcgtcaatggtattggaattgaac
gcttcagatgaacgtggaattgatgttgtgagaaacaccatcgtaaacttcgcacaaaca
aaaggacttcaagcattttcgacatcttccaacacaggcactgtgccgtttaagcttgtg
attcttgacgaggctgatgctatgacaaaggatgctcagaatgcattgagaagagtgatt
gaaaagtacacggacaacgttcgtttctgcatcatctgcaactacttggcatcaatcgtt
ccagctattcaatcccgttgtactcgtttccgattcgctcccttagatcaaaaactgatt
gttccccggttggaatacattgtggagacggaacaactgaaaatgactccagatggaaaa
gatgcacttttgattgtttcaaaaggtgacatgagaactgtcatcaacacacttcaaagt
actgcaatgagtttcgatacagtttcagaaaatacagtttaccagtgtattggacagccg
acaccgaaagaaatgaaagaagttgtgaagactctactgaatgatccatcgaaaaaatgt
atgaatacaattcaaacgaaattgttcgagaacggatatgcccttcaagatgtcatcact
catctccacgattttgtattcactttggacatcccagatgaagcaatgtcagctattatc
actggattaggagaagttgaggagaatttgtcaactggatgttctaatgaaacacagctt
gcagctgttgttgcagcttttttcgaggcaaaacgtttgtgtgtgaaagagatgaagaac
ttggaaattgaagacatggaattttaa
DBGET
integrated database retrieval system
