Caenorhabditis elegans (nematode): CELE_Y53C12B.1
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Entry
CELE_Y53C12B.1 CDS
T00019
Symbol
Y53C12B.1
Name
(RefSeq) U3 small nucleolar RNA-associated protein 13 C-terminal domain-containing protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CELE_Y53C12B.1 (Y53C12B.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_Y53C12B.1 (Y53C12B.1)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CELE_Y53C12B.1 (Y53C12B.1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Utp13
ANAPC4_WD40
NBCH_WD40
UTP15_C
Nup160
WDR54
USP47_C
Motif
Other DBs
NCBI-GeneID:
190203
NCBI-ProteinID:
NP_496100
WormBase:
WBGene00013143
Ensembl:
WBGene00013143
UniProt:
O18215
LinkDB
All DBs
Position
II:complement(9742982..9746078)
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AA seq
793 aa
AA seq
DB search
MTEPIKEIAAKRSVEAVYTGGTVRWSANGQKLFSTCTNVVKVIDLADNTASYTIGDPEDE
LRITCTAVDKNRNRLLVAYNNQIIREYSIPLDPSTTKPELARTWKTIHTAPILVMEFNEE
GHLLATGSADHIVKVWNLTEQQCTHTLKGPSVVSAILFGKHEKLVVGYIEGQLNLYNIMR
GAPKKLVNTWKSHNSHITALLQVPDSRVVVALSRDQTMSIHETETQETLRVLPLYESIEG
GAIGHNGNLFTVGEEGVVKEFVIETAKLVRKKRIASSNLDHLAYDVVSNRFLAISAEQNL
IILDFENLKIARQIVGFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTLDCQLIRGHT
ESVLSVVSPTWDTSLLASCSKDNSIIFWRLVTSPENDSCSTLVPVAAATGHANTVTALAI
SNTGRAPFLASVSTDCTIKLWGLGVSTKLKEVKIDAEKDFVEQLPKLTCSSTMVAHGKDV
NCVDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGDVKFAKNSHKLAS
CSGDMTIKIWNISEKSCLQTISGHSCAVFRVIFARNDSQLISADSAGIIKIWTIKTADCE
CSIDAHTDKIWSLSKNHNESEFVTAGTDGRIVVWKDVTEEKQKAEDNKRREAIEQDQTLT
NLLSQKRYSEALVFALTLAKPFCAFKVINALMAEETPEELGSAIRRLDTRQIEILLQFTV
KWNTNSRTSSVAQRVLYEIVHIVDPEELVSMPGAYGYIESFLPYTQRHMDRLDRAKQDVS
LFDFVWRQMRSSV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacctatcaaggaaattgccgcgaaaagaagtgtcgaagcagtttacaccgga
ggaactgtcagatggagtgcaaatggtcagaaacttttttctacatgcacaaatgttgtg
aaagtgattgatctggctgacaatactgcaagctataccatcggcgaccctgaagatgag
ctacgcattacgtgcacagctgtcgacaagaacagaaatcgccttttggtcgcctataac
aatcaaataattcgtgaatactcaattcctttggatccgtcgacaactaaaccagagttg
gccagaacatggaaaaccatacacactgctcctattctcgttatggaattcaatgaggag
ggccatttactggcgactggaagtgccgatcacatcgtgaaagtctggaatctgacagag
caacaatgtacacacacattaaaaggaccctcggtagtttcagcaattctgttcggaaaa
catgaaaagcttgtcgttggatacattgaaggacaattgaacctctataatataatgaga
ggtgctccgaaaaaacttgtaaacacatggaaaagtcataattctcatattaccgcactg
cttcaagttccggattcacgagttgttgtggctctttcgcgagatcagacgatgagtatt
catgaaacagaaactcaagaaacactccgagttcttccactctacgaatcaattgaaggc
ggagcaatcggacataacggaaatcttttcactgttggagaagagggtgttgttaaggaa
tttgtgattgaaactgcgaagttggtcagaaagaaaaggattgccagctcgaatctcgat
cacttggcctacgatgttgtttctaatcgctttttggcaatttccgccgaacaaaatctt
ataattttggattttgaaaatctgaaaattgcaagacaaattgttggattccatgacgaa
atctattcgtgctgtcttcttggaaaagatgaatctcacatggctgtcgcttccaatact
tctgaaatccgactctacaacactaaaaccctggattgtcaattaattcgtggtcacaca
gaatcagttctttccgtagtatctcctacctgggacacatctctactggcatcatgttct
aaagataattcgattatcttttggagacttgtaacatctcctgaaaatgactcttgctcc
actctggtcccagttgcggcagctacaggacatgcaaatacagtaactgctctagcgatt
tccaataccggacgagctcctttcctggcatcagtatcaacggattgtactatcaaattg
tggggattgggagtttctacaaaactaaaagaagtcaaaattgatgcagaaaaagatttt
gtcgaacagctcccaaaactgacatgcagttcaacaatggttgcacatggaaaagatgtg
aattgtgttgatatttccgaatcggatgctcttattgccactggaggaatggataaacta
gtaaaattatggcaagtggatactcacaaaatgcaattgggaatcgctggaactctatca
ggacatcgtcgtggagttggagatgttaaatttgcaaagaattctcacaaacttgcatct
tgcagtggagatatgaccattaaaatctggaacatctcggaaaaatcttgtcttcaaacc
atttccggacattcttgtgctgtattccgagtgatattcgctcgcaacgattctcagttg
atctctgcagacagtgctggaatcatcaagatttggacaatcaaaactgctgattgtgaa
tgttccattgatgcgcatactgacaaaatttggtcgctttcgaaaaatcataacgagtca
gagtttgtgactgctggaactgatgggcggattgttgtctggaaggatgttacagaggag
aaacaaaaagccgaggataataagagaagagaggctattgaacaagatcagactttgaca
aatttattgagtcagaagagatattcggaagctctcgtgtttgcactgactctagccaaa
ccgttttgtgcttttaaggttataaatgctctgatggctgaggagacaccagaagaactc
ggttccgcaattcgccgccttgacacccgtcaaattgagattctactgcaattcacagtg
aaatggaacacgaatagtcgaacatcgtcagttgcacaacgagttttgtacgaaattgtt
catatcgtggatccagaggagttagtgtcaatgcccggtgcatatggatatattgaatca
ttcctaccgtacacccaacggcacatggatcgattggatcgggcaaagcaagatgttagc
ctattcgattttgtttggagacaaatgagaagctctgtctga
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