Caenorhabditis elegans (nematode): CELE_C04H5.6
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Entry
CELE_C04H5.6 CDS
T00019
Symbol
mog-4
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_C04H5.6 (mog-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_C04H5.6 (mog-4)
Enzymes [BR:
cel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CELE_C04H5.6 (mog-4)
Spliceosome [BR:
cel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
CELE_C04H5.6 (mog-4)
Complex C
U4/U6.U5 tri-SnRNP related factors
CELE_C04H5.6 (mog-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
Helicase_C
HA2_C
DEAD
AAA_22
nSTAND3
T2SSE
AAA_30
AAA_19
NagA_C
Motif
Other DBs
NCBI-GeneID:
175117
NCBI-ProteinID:
NP_497027
WormBase:
WBGene00003392
Ensembl:
WBGene00003392
UniProt:
O45244
LinkDB
All DBs
Position
II:complement(14552504..>14561599)
Genome browser
AA seq
1008 aa
AA seq
DB search
MSVEQFINDQLHSIVGISDRSICQYVHALAKKAKSAPDLVEKLRDAGDFPISPAIQSFAD
QLMSRMPRQATSARQRGPTTAELAEQELNRLNRAVGVLEDYSASSTKTKNVRKRKESSSE
DDEAPIKASKPGKSVKPSKSDDSESDIEAMEAKLDADIAERDALAARINKKEKDKTRNVM
EKKRDDNKDKEGSSMDKLREESRRQYLKKRKVDKLEELEAIVHDDQTLFAREKLTKREKA
DMEYRKKVLEYTKAHGKAGDVMKMKRYHLPDASTKQIPSQYVEDDEEDFRPGGDGAKWEE
EQLMASMLHLGAKDAKRKEQEFELLLDEKVDFIQALQMPGTNEEVVETEAEKKKMSIEET
RKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRR
VAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYS
VMMIDEAHERTLHTDILFGLVKDIARFRKDLKLLISSATLDAEKFSSFFDDAPIFRIPGR
RFPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKA
LGSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGF
SKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPE
IQRTNLGNVVLMLKSLGIHDLVHFDFLDPPPQETLVIALEQLYALGALNHRGELTKLGRR
MAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFWSP
AGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETKSSTD
TIKIRKAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETPRWVVYFELVFTSK
EFMREMSEIESGWLLEVAPHYYKGRELEDATNKKMPKNKGKSGKDLER
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggaacaattcatcaacgaccaactacactcaatcgtgggtatcagcgatcga
tcaatatgtcaatacgtgcacgcactagcaaaaaaggcgaaaagcgcgccggatttagtg
gaaaaactgcgtgacgccggagattttccgatttccccagcgatccagtcattcgcagat
cagctgatgagtcgaatgccccggcaggcaacttcagcgcgacaacgtggtccgacaaca
gcagagcttgccgagcaggagctaaaccgtctgaatcgggcggtcggagtgttggaggat
tattcggcgagctccacaaaaaccaaaaatgtcagaaaaagaaaagagagcagtagtgaa
gacgatgaagctccgattaaagctagtaaaccaggaaaatctgtgaaaccttcaaaatcc
gacgattctgagtccgatatagaggcgatggaggcaaagctggacgcagatatcgctgaa
agagacgccttggcagcacgaattaacaaaaaagaaaaggataaaactcgaaatgttatg
gagaaaaagcgagatgataacaaggacaaagagggttcctccatggacaaactccgagag
gagtccagaaggcagtacctgaaaaaacgaaaagtcgacaagctggaggaactggaggcg
atagttcacgatgatcaaactctattcgctagggagaagctcacgaaacgtgaaaaagcg
gatatggagtaccggaaaaaagttctcgaatacacgaaagcccatggaaaagccggtgac
gtcatgaaaatgaagagatatcatctgccggacgcctcaacgaaacagatcccttcacag
tacgtggaggatgatgaggaggacttcaggccaggcggtgatggtgcaaagtgggaagag
gagcagctgatggcctcgatgcttcacctgggagccaaggatgcgaagcggaaggagcaa
gagtttgagctgttgcttgatgagaaagtggactttattcaggctcttcagatgcctgga
accaatgaggaagtagtagagacagaagccgagaaaaagaaaatgtcaattgaagaaacg
agaaagtcgttgccggtctacgcattccgtgatgctttcatcgaagctgttaaagagcat
caagtgctcattatcgagggagaaaccggatcgggaaagacgacacagctaccacagtat
ctttatgaagctggattttgtgaaggtgggaagcgtatcggatgtacgcagccgagacgt
gtcgccgcaatgtcggttgccgctagagttgctgatgaagttggatgcaagctgggcact
caggtcggctacagtattcgtttcgaggattgcacatcggagaagactgtcctcaaatac
atgacagacggaatgctgctcagagagtttctcaacgaacccgatttggctagttatagt
gtaatgatgattgacgaggctcacgaacgtactctacacacggatattctattcggttta
gtcaaagatattgcaagattccgaaaggatttgaagcttctcatctcttctgcaacactt
gacgctgaaaagttctccagtttcttcgacgacgctccgattttccgaattccgggacgc
agattcccggtggacatttactatacacaggctcccgaagcggactacgtcgacgcggct
atcgtcacaattatgcagattcacttgacccagccacttcccggcgatattttggtattt
ctgactggtcaggaagaaatcgaaactgtacaggaagcacttatggaacggtcgaaagca
ctgggatcgaagattaaggagcttattccgctgccggtttatgcgaatttgcccagtgat
ttgcaggcgaagattttcgagccaacgccgaaagatgcgagaaaggtggtcctagcaact
aacattgctgaaacttcagtcacaattgatggtatcaactatgtaattgatccaggattc
tcgaaacaaaactcatttgatgcacgaagtggtgttgaacatttgcatgttgtcactatt
tccaaggctgccgcaaatcaacgagccggtcgtgccggtcgtactggacccggaaaatgc
ttcagactctacacagcgtgggcctataagcatgagctcgaagagcaaccgatccccgaa
atccagcgaacaaatttgggaaatgtggtgctaatgctcaagtcactaggcatccatgat
ctcgttcatttcgattttttggatcctccaccacaggagacgcttgtcattgcactcgaa
caactctatgctctcggagcactgaatcatcgtggagagctgacaaagttgggacgacga
atggctgaatttccgtgtgatccgtgtatgagtaaaatgattatcgccagtgagaagtat
gagtgttccgaggaaattgtaacgattgcggcaatgctttcgtgtaatgcagctgtgttt
tatagaccgaaagcccaagtaattcacgcggattcggcacgtaaaggcttttggagtccc
gccggagaccatatcaccctaatgaatgtctacaataaatggcaagagtcgagcttctcg
caacgttggtgtgtggagaattatgtgcaacatcgaacaatgaaaagagcgcgagatgtt
cgagatcagttggttggacttttggaacgggtcgaaattgagacgaaatcttcaactgac
acaatcaagattcgaaaagcaatcacagccggatatttctataacgtttcaaaattggat
aatactggacactacaaaacggtcaagcacaagcacaccacacatccccatccaaattcg
tgtcttttcgaggaaacgcctcgatgggttgtctattttgagttggtattcaccagcaag
gaattcatgagagagatgtcggaaatcgaaagtggatggctgttagaagtggcgccccat
tattataagggtcgagaactggaagacgcgacgaacaagaaaatgccgaagaataaggga
aaatcgggaaaagatttggaacgatga
DBGET
integrated database retrieval system
