KEGG   Caenorhabditis elegans (nematode): CELE_K01G5.1
Entry
CELE_K01G5.1      CDS       T00019                                 
Symbol
rnf-113
Name
(RefSeq) putative E3 ubiquitin-protein ligase rnf113
  KO
K13127  RING finger protein 113A
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cel03041]
    CELE_K01G5.1 (rnf-113)
Spliceosome [BR:cel03041]
 Complex C
  Other components
   Complex C specific factors
    CELE_K01G5.1 (rnf-113)
SSDB
Motif
Pfam: zf-CCCH zf-C3HC4_3 zf-C3HC4_2 zf-RING_2 zf-RING_5 zf-RING_UBOX zf_CCCH_4 zf-C3HC4 zf-CCCH_2 zf-RING_10 Prok-RING_4 zf-CCCH_4 DZR_2 CBP110 zf-C3HC4_4 zf-P11 zf-CCCH_8
Other DBs
NCBI-GeneID: 176507
NCBI-ProteinID: NP_499375
WormBase: WBGene00010476
UniProt: O17917
LinkDB
Position
III:complement(10755624..10757640)
AA seq 384 aa
MDLFRKPKKRNAPVVRKKESSSDEDQDSEVKDVIQKRRRTNPMVQSTKQLDASTRRADNS
SDDSDDSDDNQDIAVATHSFAASGDAGPSGPRDQGATATLEVDTDYSHDAQAQFERVQQQ
LKEGVEKDGKILYKGSALYGAKEAKDTAKGNAASGYNRVGPVRAPQFLRQTVRWDFAPDI
CKDYKETGFCTFGDSCKFVHDRSDYKHGWEIDEEYEAGKYGAEDDANYEIHEGDDTFPED
CFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPICQQNTENIMNTAKELLTYLKRKK
QQQKQEAEKQEEEKDSDDDEKPHECDDHHHHDHEDEPEEPENDSNVPEAEEKSDEEQEIM
MEDVEGLEGGENDSESDDDDAEKD
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggatctcttccgaaaaccgaaaaagcgcaatgcacccgtcgttcgtaaaaaggaaagc
tcaagtgatgaggatcaagattcagaagtgaaggatgtgattcaaaagcgacgtcgtacg
aatccgatggtccagtcgaccaaacaactagacgcctcaacacgacgtgctgataattca
tcggatgattctgacgactctgacgacaatcaggatatcgcagtagcaactcactcgttc
gccgcttcaggagatgccggtccatctggaccacgtgatcaaggtgccactgcaacactc
gaagtggacacagactattcacacgatgcccaggctcaattcgaacgagtccaacagcaa
ctgaaggaaggcgtcgagaaagacggaaaaattctgtacaagggaagtgcactgtatgga
gccaaagaggcgaaggatacggccaagggaaacgctgcaagtggttataatcgagttggg
cccgttcgggcgccacaatttctacgacaaacagtccgttgggattttgcaccggatatt
tgcaaggattacaaggagactggattctgtacgtttggagattcgtgtaaatttgtgcac
gaccgatcggactataaacacggatgggagattgatgaggagtacgaagcaggaaaatat
ggtgctgaagacgatgcgaattacgagattcatgaaggcgacgatacgtttccggaggat
tgttttatttgcggaaatccatttgttgatccgatcgtgacaaaatgcaagcactacttt
tgcaccggttgtgcgttgaaatcgttccaaaagtcgtcaaaatgcccaatatgtcagcag
aatactgagaatattatgaataccgcaaaagagctcctaacctacctgaaacggaagaag
caacaacagaagcaagaagccgagaaacaggaagaagaaaaagatagtgacgatgatgaa
aaaccacacgaatgcgacgatcaccatcatcatgatcacgaagatgagcccgaggagcct
gaaaacgactcaaatgttccagaagccgaggagaagagcgatgaggaacaggagattatg
atggaggatgtggaagggcttgaaggtggagaaaatgactctgagagtgatgatgatgat
gctgaaaaagattga

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