Caenorhabditis elegans (nematode): CELE_EEED8.5
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Entry
CELE_EEED8.5 CDS
T00019
Symbol
mog-5
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_EEED8.5 (mog-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_EEED8.5 (mog-5)
Enzymes [BR:
cel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CELE_EEED8.5 (mog-5)
Spliceosome [BR:
cel03041
]
Complex C
Other components
Step II factors
CELE_EEED8.5 (mog-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_30
PhoH
Flavi_DEAD
nSTAND3
NB-ARC
AAA_19
Motif
Other DBs
NCBI-GeneID:
173920
NCBI-ProteinID:
NP_495019
WormBase:
WBGene00003393
Ensembl:
WBGene00003393
UniProt:
Q09530
LinkDB
All DBs
Position
II:5399538..5405810
Genome browser
AA seq
1200 aa
AA seq
DB search
MDQLEHLSLVSKVLSEVENHFGVVEKDVAEFVIHLAQENPTFDKLKKALDSQGLGDQFDD
SLTATILRIVQSMTAVKKKNKKGGDSKEDIKDSHKITLISDAKEEIKARLPALAMANTAK
EKEDNEDDLMAQLEKMEGRYESEKRLQKESDSKRNRSRSRSRSRDRKRRRSRSGDRDRRR
RSRSREDRRDRDRRDRDRDRDRGRGDRRGDDRQRDRRDRRDDGGARKSEVAEIGKIYDGR
VNSIQSFGAFITLEGFRQKQEGLVHISQIRNERVQTVADVLKRGENVKVKVNKIENGKIS
LSMKEVDQNSGEDLNPRETDLNPDAIGVRPRTPPASTSSWMNPEASGVGQGPSTSIGGGK
ARVRISTPERWELRQMQGAGVLTATDMPDFDEEMGVLRNYDDESDGEDIEIELVEDEPDF
LRGYGKGGAEIEPVKVVKNPDGSLAQAALMQGALSKERKETKIQAQRERDMDTQKGFSSN
ARILDPMSGNQSTAWSADESKDRNNKMKEMPEWLKHVTAGGKATYGRRTNLSMVEQRESL
PIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAAMS
VAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIMLD
EAHERTIHTDVLFGLLKAAARKRPELKLIITSATLDSVKFSEYFLEAPIFTIPGRTFPVE
ILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVP
ELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIY
NPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNL
ASTLLQLKAMGINNLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPL
EPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPEGDHLTL
LAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGRDVSRVQK
AICSGFFRNAAKRDPQEGYRTLTDGQNVYIHPSSACFQQQPEWVVYHELVMTTKEYMREV
TAIDPKWLVEFAPSFFKIGDSTKLSTFKRNQKIDPLFDKYADANAWRITRVKKRIYNPNK
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcttgagcacctctcacttgtgagcaaggtcctcagtgaagttgagaaccat
tttggtgtcgtcgaaaaagatgtcgctgagtttgttattcatttggctcaagagaatcca
acatttgataaactgaaaaaggctttggatagtcagggacttggggatcagtttgatgat
tccctcactgcgaccatacttcgtatagtacaaagcatgactgctgttaaaaagaaaaac
aagaaaggtggtgattcaaaagaagatatcaaggattcacacaaaattacattgatttct
gatgcaaaagaagaaattaaagcacgacttccagctctagcgatggcaaatactgcgaaa
gaaaaggaagataatgaagatgatcttatggctcagttagaaaagatggaaggccgatat
gaaagtgagaaacgtcttcaaaaggaatcagattcaaaacgaaaccgttcaagaagtcga
tcaaggagtcgtgatcgaaaacgaagaagaagtcgtagtggtgacagggatcgtcggaga
cgtagtaggagtcgtgaagacagaagagatcgagataggagggatcgggacagagacaga
gacagaggacgtggggatcgaagaggagacgacagacaaagagatcggcgtgatcgacga
gatgatggtggtgctagaaaatccgaagttgcagaaatcggaaaaatctacgatggtcgt
gtaaacagtattcaatcgttcggagctttcatcacactggaaggtttccgtcaaaaacaa
gaaggacttgttcacatctcccaaattcgaaatgaacgagttcaaaccgtcgcagatgtt
ttgaaaagaggagaaaatgtcaaagttaaagttaataagattgaaaatggaaaaatctcg
ttgtcaatgaaagaagtcgatcagaatagtggagaagatttgaatccacgcgagaccgac
ctgaatccggatgcaatcggagttcgtccacggacaccgccagcatcaacttcctcgtgg
atgaatcctgaagcaagtggagtaggacaaggtccttcgacctcaattggtggtggaaag
gcgagagttcgaatttcgacacctgaacggtgggaattaagacaaatgcaaggagccgga
gttctcacagccacagatatgcctgattttgatgaagaaatgggagttctaagaaattat
gatgatgaaagtgatggcgaggatattgaaatcgagcttgtcgaagacgaacctgacttt
ttacgtggatatggaaaaggcggtgcagaaatagaacctgtaaaagttgtcaaaaatccg
gatggttcattagctcaagcagctttaatgcaaggtgctctttcaaaagaacgaaaagaa
acgaaaattcaagcacaacgagagcgtgatatggatacacagaaaggattcagttcaaat
gctcgaattcttgatcctatgtctggaaatcagtcgactgcgtggagtgctgatgagtca
aaggatcggaataataaaatgaaagaaatgccagaatggttgaaacatgtgacagctggt
ggaaaagcgacttatggaagaagaaccaatttgagtatggttgagcagagagaaagtctt
ccgatctttgcgttgaaaaagaatctgatggaagcaatgattgataatcaaattcttgtc
gttgttggagaaactggatcaggaaagactactcagatgacacaatatgcaattgaagct
ggacttggaagacgtggtaaaattggatgtacccagcctcgtcgtgttgcagcaatgtcc
gtagcaaagcgtgtggcagaagagtacggttgtaagctgggaactgatgttggatataca
attcgtttcgaagattgtacaagtcaagatactattatcaagtacatgacggatggtatg
cttctgagagaatgtcttattgatcctgatctttctggatattcgttgattatgcttgat
gaggctcacgaacgtacaattcatacggatgtcttgtttggattattgaaagctgctgct
agaaaacgtccggaactgaagctgattatcactagtgccaccttggattcagttaaattt
tcagagtatttcctggaagctccgatctttacaattcctggaagaacattccccgttgag
atcctgtacacaagagaaccagaatcagattaccttgaagctgcacatattactgtaatg
caaattcatttgactgagccacctggtgatgttcttgtgtttttgactggacaagaagaa
attgatacatcgtgtgaagttttatatgaacgaatgaaatcaatgggacctgatgtgccg
gagctgattattcttcctgtctacggagctcttccaagtgaaatgcaaacaagaatcttt
gatccagctcctgccggaaagcgaaaagttgttattgctacgaatattgccgaaacttct
ttgacaattgatggaattttctatgtcgttgatccaggatttgtgaaacagaagatttac
aatccgaaaagtggaatggattccttggttgtcaccccaatctcacaagccgcagcaaag
caacgatcaggacgtgcaggacgtacgggacctggaaaatgctatcgtctctacacagaa
cgtgcattccgtgatgagatgcttccgacacctgttccagaaattcagcgaacaaatttg
gcgtcaacacttcttcagcttaaagctatgggaatcaataatttgattgattttgatttc
atggatgctccacctctggattcaatgattactgctctcaatacacttcacacgctttca
gcacttgatggagatggtcttctcacgaaacttggtcgtcgaatggctgaatttccattg
gaaccatcactttccaaattgttgatcatgtctgtcgatctgggatgctcagaagaagtt
cttacgattgtggcaatgctcaatgtgcaaaacattttctatcgacctaaagaaaaacag
gatcatgctgaccagaagaaggcgaaattccatcaaccagaaggagatcatttgacactt
ctagcggtttacaattcatggaaaaaccatcatttctcacaaccatggtgtttcgaaaat
ttcattcaagtgagaagtatgaagagagctcaggacattcgtaagcaattactcggaatc
atggatcgtcataaacttctgatggtcagttgtggacgggatgtatcgagagttcagaag
gctatttgctctggattcttccgaaatgctgcaaaacgtgatccacaggaaggatatcga
acattgactgatggacagaatgtttatattcatccatcatcagcatgtttccaacaacaa
ccagaatgggttgtatatcatgaactcgtcatgacaactaaggaatatatgagagaagtc
accgcaatcgatccaaaatggcttgttgaatttgcaccgtcattcttcaaaatcggagat
tctaccaaattatcaacattcaaacgaaaccagaaaatcgatccgttgttcgacaagtat
gcagatgcaaatgcctggcgtatcacacgtgtcaagaagaggatatacaatcccaacaaa
taa
DBGET
integrated database retrieval system
