Caenorhabditis elegans (nematode): CELE_Y37E11B.4
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Entry
CELE_Y37E11B.4 CDS
T00019
Symbol
taf-2
Name
(RefSeq) Transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CELE_Y37E11B.4 (taf-2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cel01002
]
CELE_Y37E11B.4 (taf-2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_Y37E11B.4 (taf-2)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_Y37E11B.4 (taf-2)
Peptidases and inhibitors [BR:
cel01002
]
Metallo peptidases
Family M1
CELE_Y37E11B.4 (taf-2)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CELE_Y37E11B.4 (taf-2)
Coactivators
SAGA/TFTC/STAGA complex
CELE_Y37E11B.4 (taf-2)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
CELE_Y37E11B.4 (taf-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
Motif
Other DBs
NCBI-GeneID:
192051
NCBI-ProteinID:
NP_001343606
WormBase:
WBGene00006383
Ensembl:
WBGene00006383
LinkDB
All DBs
Position
IV:complement(3584400..3593613)
Genome browser
AA seq
1092 aa
AA seq
DB search
MDFSEASTSGDRVNGFAKPFPPKPREGAPPPAPPLAPGASTSQAPPPLQPPPVIESAEKF
YVPGVEEKSKFRILSQQVEISNLNISTRSFNVRTEIVLLPCEKSLYQLDLHIGKCSLLPN
EVPGSASKVTLNGVECEYSRRDFWKDLAQEKSISSLEPVLYEKLAENDYELQILIPKEVR
KKIKHRKAVRLRVDTVVRDPPRGLQFVDFNEHDCHVFTYHTPHISGAREWTVCLDEPDQL
ALWELTFELEPHLVPVASGELEEKREVSENGKIRYKFHQTVPTSACNIGWAIGRFKLEPH
PESPTIYTFSLPGLEPFVNHTTMYLDKMVEFLEEKLSCRFPYPTLKVVFVDQCTEEIQVY
SSLLIVPTAMLYHKKIIDVVQEARQKLIFSIALQFFGCLISPAQWWHWWIPVSIARFLTS
LYVETKLGTAEARWQLKRAMDDVCDYEHQWGKIVLSPPEPTKKLPLHVDPRHEYTASPLY
VEAMLKKGFLTMRMLQRRIGLEPFMRVLHRVLTVGLDMSEKKTTPAAWRHLLTTTESFFR
SVISVTGKEIPSFLSQFVRTGGHAAFAVKFDFNRKRNIVEIEIKQDDTEGNGRTQYTGPL
SVVVQEVDGAFTHTIQIDGAVSHAEISCHSKGRKQRKKKVPLLTGEEIEIDLTNMDAESP
ILWLRIDPDYLLIREITISQPMFHWEYMLRYERDVIAQMEALERIQALPSAHSRSVIVDA
VANEKFFYRIRYRAAFVLTFVQNRKSEALTVGTPVLINMFRESFGSKAATNIPRSNNFVV
TAQNLQQYFVMQALPQAIARLRRQSGECHEDVQPFLLDLIKFNDNSTNRYSDDFYRAALY
NSLASSVFPHDALPCHVELPENLSNDVRVLIKEFTYALNMDTVSPSWGRVVGAAALTGLY
QLQKCGYLPLDSQLLWTFSHPNCCVQMRRCAITLIIDRIVNDPHAADTRMLDLSRILELA
ELEQDPSIRRMIPRLLAQTPPFGTYNNTIFGSENAANTAETAERLWKLCTNSSIDSCIRS
GFLDVYYSLYALGAPPALGGPEESVGIHRAYVTVPNAASTFATSQWHNSGYEAARRSPPR
RDFGDETMNLMQ
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcggaagcttcaacgtcaggcgatcgagtcaacgggtttgccaaaccattt
ccaccaaaaccacgagaaggagctccaccaccggctcccccacttgctccaggagcatca
acttctcaagctccaccaccactacaaccaccaccagttatagaatcggctgagaaattc
tatgtgcctggtgtggaggaaaaatcgaaatttcgaatactttcccagcaggtcgaaatc
tctaatcttaacatctccaccagaagcttcaatgtccgaaccgaaatcgtgctgctcccg
tgcgaaaaatcactctaccaactcgatttgcacattggaaaatgctccctactgcccaac
gaggtgccgggctcggcgagcaaagtgacgctgaacggagtggaatgcgaatattccagg
cgggatttctggaaggatttggctcaggaaaagagcatttcaagtctggagccggtgctc
tacgaaaagctcgccgaaaatgactacgagcttcagattctcattccgaaagaggttcgg
aagaagatcaagcatcggaaagcggttcggctccgtgtggatacggtagtccgcgatcct
ccacgtggactacaatttgtggattttaacgaacacgattgtcacgtattcacctaccat
accccacacatttcgggagcccgagaatggactgtttgccttgatgagcccgatcagttg
gccctctgggagctcacttttgagttggagccccatttggtcccagtggccagtggggag
cttgaggagaagcgagaagtctcggaaaacgggaaaattcggtataaatttcatcaaact
gtgccgactagtgcgtgtaatattggatgggctattggacggtttaagctggagccgcat
ccagagtcgccgacgatctacacattctcgctgcccggtctcgaaccattcgtcaatcac
accacaatgtacctcgataaaatggttgaattcctcgaggagaagctctcgtgccgtttc
ccgtacccaactctaaaagtagtattcgtcgatcaatgcactgaagagatccaagtctac
agctcattgctcattgtgccaaccgcaatgctttaccacaagaaaatcatcgatgtggtg
caggaggctcggcagaagctcattttcagcattgctctgcaatttttcggctgcttaatc
tccccggctcagtggtggcactggtggatcccagtctccatagcacgctttctgacgagc
ctttacgttgagacaaagctcggcaccgctgaagctcgttggcagctcaaacgagctatg
gacgatgtctgtgactatgagcatcagtggggaaaaattgtgctttcgccgccggagccg
acgaagaagctcccactccacgtggatccccgacatgagtacacagcgtcaccgctctat
gttgaggcgatgcttaagaagggatttttgacgatgcgaatgcttcagcggaggattgga
ttggagccgtttatgcgagtgcttcatagggttctgacggttggactggatatgagcgag
aagaagacaacgcccgctgcgtggaggcatttgttgactacaacagagtcgttttttaga
agcgtaatctcagtaaccggaaaagaaatcccgagcttcctaagccaattcgtgcgaacc
ggcggtcatgccgcgtttgccgtaaaattcgatttcaatcggaagcgcaacattgtagag
atcgaaatcaagcaggacgacacagaaggcaacggtcggactcagtacacgggccctcta
agtgtagtggttcaggaggtcgacggagctttcacccataccatccaaatcgacggagcc
gtctcccacgccgaaatctcgtgtcattccaagggtcggaagcagagaaagaagaaggtt
ccactgctaaccggcgaagaaatcgaaatcgatttgacgaatatggacgccgaatcgccg
attctttggctccgaatcgatcccgattatctcctgatccgtgagataacgatcagtcag
ccaatgttccactgggagtacatgctccgctacgagcgtgacgtcatcgcacagatggag
gctttggagaggatacaggcgctgccgtcggcacatagtcgcagtgttattgtggatgcg
gtggcgaatgagaagttcttttatagaattcgatatcgagcggcgtttgtgctcactttc
gttcaaaatcgaaaatccgaagcgctcaccgttgggacgcccgtcttgatcaacatgttt
cgcgaaagctttggctcaaaagcggccaccaacatcccacgctccaacaatttcgtcgtc
accgctcaaaacctacagcaatattttgtaatgcaggccctgcctcaggcgatcgctcgc
ctacgccgacagtcaggcgaatgccacgaagacgttcaacctttccttctcgacctgatt
aagttcaacgacaactcgacgaatcgctactcggatgatttctaccgtgcggcgctgtac
aattcgctggcttccagcgtcttcccgcatgatgctctgccatgccacgtggaattacct
gagaatctgagcaacgatgttcgggtgctcatcaaggagttcacgtacgcgttaaatatg
gatacggtcagcccgagctggggccgagtcgtcggagccgccgcgctcaccggactctat
cagcttcagaaatgtggatatctcccgctggactcgcaacttttgtggacattttcccat
ccgaactgttgtgttcaaatgcgacgatgtgccattactctgatcattgatcggattgtt
aatgatccgcacgcggcggatactcggatgctcgacttgtcaaggatcctggagctcgcc
gagctggaacaagatccgtcgattcggagaatgattccgaggctgttggcgcaaactccg
ccgtttggcacttataataacacaattttcggctcggaaaatgccgcgaacaccgctgaa
actgcagaaagactatggaaactgtgcacaaattcgtcaattgatagctgtattcggagt
ggttttctggatgtctactactctttatatgctctcggagcaccaccggctcttggtgga
cccgaggagtctgttggaattcatcgagcctacgtcacagttccgaacgcggcgagcaca
tttgccacgtcacagtggcataatagtggatacgaggcggcacgcaggtcaccaccgaga
cgagattttggagatgaaactatgaatttgatgcaataa
DBGET
integrated database retrieval system
