Caenorhabditis elegans (nematode): CELE_C06E1.10
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Entry
CELE_C06E1.10 CDS
T00019
Symbol
rha-2
Name
(RefSeq) Putative ATP-dependent RNA helicase rha-2
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_C06E1.10 (rha-2)
Enzymes [BR:
cel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CELE_C06E1.10 (rha-2)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
90S particles
Helicases
CELE_C06E1.10 (rha-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
ATPase
AAA_30
ResIII
nSTAND3
Motif
Other DBs
NCBI-GeneID:
176207
NCBI-ProteinID:
NP_498895
WormBase:
WBGene00015525
Ensembl:
WBGene00015525
UniProt:
P34305
LinkDB
All DBs
Position
III:complement(8609882..8614569)
Genome browser
AA seq
1148 aa
AA seq
DB search
MGKRKTKEDNASEDYDANELMIVPGEKRKKLEKSGEKSATGGKKNRNFAKEKEVAKLTKQ
AKRKLAAVQSRKALKQTQEELFAGLAEFQLDPSKLCQLSSSTKLSKEPEKAPVFPEKLKV
FSGKTKTEAKRTQQDYYPTDDESSSEEEEEEEEGDNDIEDAGNTVEVKIEPIDLDDVDEA
IDGNPETNLDQIVVKREDDEESDNEDILALPTTTVINRKKVIVERSKEIQKSRAELPIFA
EEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGELIGITEPRRVAAIAMAQ
RVGVELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHER
SMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATLRLDDFTHKKLFPLLTPKVIKVDARQF
PVSVHFEKRTPDDYIASAFRKTCRIHETLPPGAILVFVTGQHEVKQLITKLKKRYPVVYE
TDKNGEVLVKGTKEWKEKKVEAAKSIKLEDFKEETPETEDFEDVDDGLMDGDDMNERGAA
EAFDDYEEFENGDGDLSDGKVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGM
RLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAG
RISAGHAYRLYSSAVYQDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQM
LESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAI
LLISLLSVREPLIPVSSLRGDTPEETKELMKNVLKERRRWCSHTGARRLGDLKVLMHAAS
VAEQIKYNARECEKVGLRVKALVEARKLRQQLTNIVNASCKKEHAAALDSDLPPPTDQQA
QLLRQMVVASFSDRLARRVDRSVGQEEVQKGAYETTLIKGHVFIDPCSVVFTEEPEFVIY
QELVQVNEKKLMTSVCAVDKEWLSRLAESYCNYGEQDKNQEPIYDPVKDMVVKTVKVTFG
PLNWELPNENRSVPHDIMMYRYFALFLLDGLVFEKLKEYTPKLLAPPSTMVKSWAKLQKR
TEMLLNKLIEKEVTTRSSLKEQWLKNENWLLEEYLEWVPESVHQQISLMWPPLEDHEKTI
KMGRNKKY
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacgcaaaacaaaagaagataatgcttcggaagactacgacgcgaacgagttg
atgattgtgccgggcgagaagcgtaagaaattggaaaaatctggagaaaaatctgcaact
ggtggaaagaagaatagaaatttcgcgaaagaaaaagaggttgccaagctgacgaagcag
gcgaaacgaaaacttgcggcggttcagtcaaggaaagcgctgaagcaaacgcaagaagaa
ctattcgcaggacttgctgaatttcaactagatccttctaagctctgccaactaagttcc
agcacaaaactttctaaagagccagaaaaagctcccgtatttccagaaaaattaaaagtt
ttctctggcaaaactaaaactgaagctaaacgaactcagcaagattattatccaactgat
gatgaatcatcttctgaagaagaagaagaagaagaagaaggcgataatgatattgaagat
gccggaaatacagttgaagttaaaattgaaccaattgacttggatgatgttgatgaggca
attgatggaaatccagaaactaatttagatcagattgtagtaaaacgggaagatgatgaa
gagtctgataatgaggatattttggcgctcccaactacgacagtcattaatcgaaagaaa
gttattgttgagagaagcaaagaaattcaaaaatcccgtgccgaacttccaatttttgcc
gaagaaatgcgaattgtcgaagctatcaatgagaatttggtgacagtagtctgcggagag
actggatccggaaagaccacccaaattccacaattcctttacgaagctggatatgcatca
gaaggcgaactcattggaatcaccgaacctcgacgtgtcgcagcaattgcaatggctcag
agagttggagttgaattggcaaagcccgacgaagtttcctatcaaatcagatatgaagga
actcgatcagaaacaacaaatattttattcatgacggatggagtgttgatgaaggaaatg
gaacaggatgtcatgctgaaaaaatactctgtaattctcatcgatgaagcccacgaacgc
tcaatgtacagtgacgtgttaatcggtatgctgtcaagaattgttccacttcgttccaaa
accgcccgtccgttgagattagtaatcatgtctgcaacactgagacttgatgatttcacg
cataaaaagctcttccctcttttaactccaaaagttatcaaagttgacgcccgacaattc
cctgtctccgtacatttcgaaaaacgaactcccgatgattatattgcatctgcattccga
aaaacgtgtcgaattcatgaaactctaccaccgggtgccattctagtctttgttacagga
caacatgaagttaaacagctgattacaaagctgaaaaaacgatatccggtggtttatgag
actgataaaaacggagaggttctagttaaaggaaccaaagaatggaaggaaaagaaggta
gaagctgccaaaagtatcaagttagaagattttaaagaagaaacaccggaaactgaagat
tttgaagatgtagatgatggattaatggatggagatgatatgaatgaaagaggtgctgct
gaggcgtttgatgattatgaagaatttgagaatggggatggagatttatccgatggaaaa
gttgagaactcgattggagctccacctgctgactgtgaaccactttactgcttacctttg
tactcattactctcaatgggaaaacagagaagagtgtttgatgaaactccggctggaatg
cgtctttgcgttatttctacaaatgttgctgaaacttcattgactattccaggcgtgaaa
tacgttattgacggaggtttcgagaagcgtcgtctctacgattcaatcaccggagtgtca
cgttttgcagtttgtcgaatttctcaagcatctggtgatcagcgagcgggacgtgctgga
agaatctctgcaggacacgcctatcgtctctactcttcagctgtataccaagattttgtg
aaattcgcagatcctgagattctctcgaagcctgccgatcagctagtactccatctaaaa
tcgatgaatattgttaaagttgtcaattttccattcccatcagctcctgatgagcaaatg
ttggaatcggctgagaagcgtctgtgccgacttggagcactttctgagagcacgaaaaat
ggaaaaacggaagcaagaatcacgaaactcggaaaaacattggcagtgttcccactggca
ccgtcttatgcaaaattcattgctatggccgatcagcataatttgatgagtcatgcgatt
cttctaatttcattactatcagttcgtgagcccctaatcccagtatcatccctccgtggc
gacacgccagaagaaacaaaagaattgatgaagaatgttctgaaagaaagaagaagatgg
tgttcacatactggtgccagacgattaggtgatctaaaagttctcatgcatgcagctagc
gttgccgagcagataaagtataacgcccgtgagtgcgaaaaagtcggtctccgagtgaaa
gcactggttgaagcaagaaaactacgtcagcaactcacaaatattgttaatgcttcttgt
aaaaaagaacatgcggctgcgttggattcagatctgccgccaccaactgatcaacaggca
cagcttctcagacaaatggttgttgcaagtttttctgatcgcctggctcgtcgcgtcgat
cgttctgtcggacaagaagaagttcaaaaaggtgcatacgagacgacattaatcaaggga
cacgttttcattgatccatgctcagtcgtattcacagaagaaccagaatttgtgatctat
caagaattggttcaagtaaatgagaagaagctgatgacgtcagtgtgtgcagttgataaa
gaatggctcagtagattggctgaatcatattgcaattatggagaacaggacaagaatcag
gaaccgatttacgatccagtcaaagatatggttgtgaaaacagtgaaagtgacatttgga
ccgttgaattgggaattgccgaacgaaaatcgaagtgtaccacatgatatcatgatgtat
agatattttgcactattcctcctcgatggattggtttttgaaaaactcaaagaatatact
ccgaagctactagcaccgccatcaacaatggtcaagtcttgggcaaaattgcagaaacga
acggagatgttgttgaataagttaatcgagaaggaggtaacaacgcgatcatcactgaaa
gagcaatggttgaaaaatgagaattggttgctggaagaatatttggaatgggttccagaa
tccgtgcatcaacaaatttcccttatgtggccaccgcttgaagatcatgaaaagactatt
aaaatgggtagaaacaagaaatactaa
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