KEGG   Caenorhabditis elegans (nematode): CELE_Y116A8C.32
Entry
CELE_Y116A8C.32   CDS       T00019                                 
Symbol
sfa-1
Name
(RefSeq) Branchpoint-bridging protein
  KO
K13095  splicing factor 1
Organism
cel  Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:cel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cel03041]
    CELE_Y116A8C.32 (sfa-1)
Spliceosome [BR:cel03041]
 Complex A
  Other components
   Complex A specific factors
    CELE_Y116A8C.32 (sfa-1)
SSDB
Motif
Pfam: SF1-HH KH_1 zf-CCHC zf-CCHC_6 zf-CCHC_3 zf-CCHC_4 KRR1-like_KH2
Other DBs
NCBI-GeneID: 178486
NCBI-ProteinID: NP_503033
WormBase: WBGene00013808
Ensembl: WBGene00013808
UniProt: G5EF97
LinkDB
Position
IV:complement(17103825..>17110982)
AA seq 699 aa
MSKTGGNTEPMPFIRKWGNEAGEDLGAAPSATAAPPPALVVPTISSMSSGDNKSPSRSES
VSDRKRDRSRSRDRDRKKDRKKKDRSRERDRERRSSRSRSRSPRDRDRERRRRRSRSPPP
RRRSRSGGDRRRRERSPPSMVPNSPQRVKEPVINPLIREDLAAAVESGAVPVEAVQAGAV
VALNPAKKERRSRWSTTKSFVPGMPTILPADLTEDQRNAYLLQLEIEDATRKLRLADFGV
AEGRERSPSPEPVYDANGKRLNTREVRKRQELEQLRHEKIQALLKINPNFKPPADYRAPN
IRLHDKVWIPQEQFPDLNFVGLLIGPRGNTLKSLEAETGAKIIIRGKGSIKEGKLTNRLG
PMPGENEPLHAYVTGTDMNVIKKACEKIKQVIAEATALPDNNELRKLQLRELALLNGTFR
PEDLANGARCSNCGSDEHKSWECPDAPNVTNQIKCTNCGAFGHISKDCKNPKGMYASEAG
MDDEYSALMAELGETPAAGAGAGGGGGGHVASAGGGISAMTGAGGEAPGGGAGGRGGGAH
GGAGRGGGYQGGRGGGRGFQNPRDLFGPPKGEEEQQQQANASMQHGYYDHYQQYAYPNQY
QQPYGAPAPPGGSAYGHQQQQQQQQQQDYSDFYTSPGARGGAGAKANKGWYGSGGGSSMP
MPVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPPPPS
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgtcgaaaactggtggaaacacggagccaatgccattcatccggaaatggggcaacgaa
gctggcgaagatttgggagctgcccccagtgcaacagcagctccaccaccagcacttgtt
gtgccaacaatttcctccatgtcgtctggtgataataaatcgccatctcgttcggaatcg
gtgtctgatcgaaaaagggaccgatcacgttctcgtgatcgtgaccgcaagaaggatcga
aagaagaaggatcgttcacgtgaacgagatcgtgaacgccgatcctctcgttcccgttct
cgatctcctcgagatagagatcgtgaacgtcgtcgtcggcggtctcgatcaccaccacct
cgtcgtcgaagccgaagcggtggagatcgtcggcgtagagaacgatcacctccgtcaatg
gttccgaatagtccgcaacgagttaaagaacctgtgataaatccattgattcgggaagat
ttggctgcggctgttgaaagtggagcagtacctgttgaagctgtacaagctggtgcagtt
gttgcgttgaatcccgccaaaaaagaaagaagaagtcgttggtctacaacaaaaagtttt
gttccgggaatgccaacaattctaccagctgatttgactgaggatcaacggaatgcatat
cttcttcaactcgaaattgaggacgccacacggaaactacgtctcgcagattttggagtc
gccgagggaagagaacgatctccatctcctgaaccagtttacgacgcaaatggtaagcgg
ttgaacactcgtgaagtgcggaaacggcaggaattggaacagttgagacatgagaaaatt
caagctttattgaagattaatccgaatttcaaaccgcccgctgactatcgtgctccaaac
atccgtctacacgacaaagtctggattccccaggaacaatttcctgatctcaattttgtc
ggcctactcattggtccacgtggaaatacgctgaaaagcttggaagctgaaactggagcc
aagattattatcagaggaaaaggatctataaaagagggaaaattgacgaatcgactcgga
ccgatgcctggagaaaatgagccattacatgcatatgtaactggaactgatatgaatgtt
atcaaaaaagcatgtgagaagattaaacaagtgattgctgaagccactgctctgccggat
aacaatgagctcaggaagctgcaactgagagaactcgcactgttgaatggaactttccga
ccggaggatttggcaaacggagctcgttgctcgaattgcggctcagacgagcacaaatca
tgggaatgcccggatgctccaaatgtgacaaatcaaataaaatgtacaaattgtggagca
tttggtcatatttcaaaggattgtaaaaatccaaagggaatgtatgcatcagaagctgga
atggatgatgaatattcggctctgatggctgaattgggtgaaactccggctgctggagct
ggagccggaggaggaggtggaggacatgttgcatcagctggtggtggaatttcagcaatg
actggagcaggaggagaagctcctggtggtggagctggaggacgaggtggtggagctcat
ggaggagctggaagaggtggaggatatcaaggtggacgtggaggaggacgtggattccag
aatccacgggatttatttggaccaccgaaaggagaagaagagcagcaacagcaggcgaat
gcttcgatgcagcatggatattatgatcactatcaacaatacgcctatcctaatcaatat
caacaaccttatggtgcacctgcacctccaggaggatcagcttacggtcaccaacagcag
cagcagcagcagcaacaacaagactacagtgatttctacacaagcccaggagcccgtgga
ggagctggagccaaagccaacaaaggatggtacggaagtggtggcgggtcgtctatgccg
atgcctgtacctccaccaggcggcctaggcggtttcatgcctccaccacctccaccacca
ccaatgcctggagatttgtcgtcacttttggccgctgctccaccgccaccgcctagttaa

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