Caenorhabditis elegans (nematode): CELE_H06I04.3
Help
Entry
CELE_H06I04.3 CDS
T00019
Symbol
H06I04.3
Name
(RefSeq) Putative rRNA methyltransferase
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_H06I04.3 (H06I04.3)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
CELE_H06I04.3 (H06I04.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
175414
NCBI-ProteinID:
NP_497655
WormBase:
WBGene00019168
Ensembl:
WBGene00019168
UniProt:
Q9N5N9
LinkDB
All DBs
Position
III:<3070523..>3085268
Genome browser
AA seq
833 aa
AA seq
DB search
MGKKVKIGKQRRDKYYKLAKEAGYRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQ
VASQFMPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWSADCVLHDGAP
NVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKRVHV
WKPAASRLESAEIFVVCEVYQKPDKVGAEYLDPKKVFANPDGSEGTKPNPQNLLIGKQKK
AKAEGYDTDSLAIHSTINATDFIKSSGYLDILGTANVITLDDEKWKNHEKTTEEVIEYMN
DVKVLGPRELRVLLRWRKSMLETLEEQRKAVEGEAKEVEIEENLTEEQLEDRAMAEIDEL
IAKASEDEKAALKKKKKKMLKAKARVLKRRELKMIIDGDEGPQAEDQEVFQLKKIRKAKE
LAEITKDTQAPDFDMMEDGDSDEEEGLGEGEWETHGEEGENSDEDENELIHTEKSGMSKM
EKRNARTESWFEKEEISGLVSDEDDDDEMNAIEKHIGKNRSKKTENYENTVSFDDSKGKK
KGKKGGKGGEDDGFNTNDADEQASESESSDAEMDEVAKEKLSRFDAQIDLDDDDEEERYE
DEGRRAAKRKCDKKIIGEDLKPVAKKRKLTPEQLAIGEQMIYSAKAARNLEDEAWNRYAN
NDEDLPDWFADDEKKHYFKQTPVTKEQVALYRERMREFNARPSKKVAEAKARKQKKMQRK
LESAKKKAEGILENDQMEHSEKVREMKKVYANATRKEKKKVELVRMTKGKKGKTGRPNGQ
YKLVDSRMKKDLRAAKAKEKTKGRGGKRGIPKKTGGGGGGRGRGGGGRGGGRR
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaggttaaaattggaaaacagcgtcgtgataagtattacaagcttgccaag
gaagctggataccgatcacgtgccgcgttcaaattggtccaactcaacaaaagattcgaa
tttttggaaaaatcccgtgcgacggtcgatctttgtgcagcgccgggaggatggatgcaa
gtagcgtctcaattcatgccagtctccagtttaatcgttggagtcgatttggcaccgatc
aagccaatcaagaactgtatcgctctgcagggtgatattacgacgaatgagactcgtgcg
gccattaaaaaggagttgaagacatggagtgcagactgtgtacttcacgacggagctcca
aatgtcggtctaaattgggttcatgatgcatttcaacagaattgtctcacactttcggct
cttaaactcgccacacaaatcctacgtaaaggcggtacttttgtgacaaaagtgttccgt
tcaaacgattattcgtgtttgattcgcgtttttgagaagcttttcaagcgcgttcacgtc
tggaaaccggcagcttcacgtctcgagtctgccgagattttcgtcgtttgtgaggtctat
cagaagcccgataaagttggagccgagtatttggatccgaaaaaagtttttgcaaatcct
gacggctccgaaggaaccaaaccgaatccacagaatttactgattggaaaacaaaaaaaa
gcaaaagccgagggttatgatacggattcacttgcaattcattcgacaattaatgcaacg
gattttattaaatctagtggatatttggatattcttggaactgccaatgttatcactctt
gatgatgaaaaatggaaaaatcatgagaaaactacggaagaagtgattgaatacatgaat
gatgtcaaagttcttggccccagagagctgagagtcctcctacgctggcgtaaatcaatg
ttggaaacactcgaagaacaacgaaaagccgtcgaaggtgaagcaaaagaagtagaaatt
gaggaaaatctgacagaagaacaactagaagatcgtgcaatggcagaaatcgatgagctc
atcgcaaaagcttcagaagacgagaaagcagcgttgaaaaagaagaaaaagaagatgtta
aaggcaaaagctcgtgtgctcaaacgtcgagagctcaaaatgattattgatggagatgag
ggaccacaggctgaagatcaagaagttttccagttgaaaaagattcgaaaagctaaagaa
ttggctgaaatcaccaaagatacacaggcacccgattttgatatgatggaggatggagat
tcggacgaagaagagggtctcggtgaaggagaatgggaaactcatggagaagaaggcgaa
aattcagatgaagatgaaaatgaattaattcatacagaaaagtctggaatgagtaaaatg
gagaaacggaatgcacgaactgaatcatggtttgaaaaagaagaaatttctggattagta
tcagatgaggatgatgatgatgaaatgaatgcaattgagaagcacatcggaaaaaatcga
tcgaaaaagacggaaaactatgagaatactgtgtcatttgatgattctaagggcaaaaag
aagggaaagaagggtggaaaaggcggagaggatgatggttttaataccaatgatgccgat
gaacaagcttccgaatcagagtcctccgacgctgaaatggatgaagtggcaaaggagaag
ctgagccgattcgatgcacaaattgatttggatgatgatgatgaagaagaaagatatgaa
gatgaaggaagacgtgctgcaaaacgaaaatgtgataagaaaataatcggagaagatttg
aaaccagtggcaaagaagcgtaaattgacacccgaacagttggcaatcggtgaacaaatg
atctactcagcgaaggcggcaaggaatttagaggatgaagcatggaatcgatatgcaaat
aatgatgaagatcttcctgattggtttgctgatgatgagaagaaacattatttcaagcag
acgcctgttacaaaggaacaagttgctctgtatagggaacgaatgagagaatttaatgca
agaccatcgaagaaggttgccgaggcgaaggctagaaaacagaaaaagatgcaacgtaag
ctggaatcggcaaagaaaaaagctgaaggaattcttgaaaatgatcaaatggagcactcg
gaaaaggttcgagaaatgaagaaagtgtatgcaaatgcgacgagaaaggagaaaaagaag
gttgaattagttcgaatgacgaaaggaaagaagggaaaaactggacgaccaaatggacaa
tataagcttgtcgatagccgtatgaagaaggacctccgtgcagcaaaagccaaagaaaag
acaaaaggacgcggtggaaaacgtggaattccaaagaaaactggtggcggaggtggtggc
cgtggccgtggaggtggtggccgaggaggcggaagacgctga
DBGET
integrated database retrieval system
