Caenorhabditis elegans (nematode): CELE_F13H8.9
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Entry
CELE_F13H8.9 CDS
T00019
Symbol
scly-1
Name
(RefSeq) Aminotransferase class V domain-containing protein
KO
K01763
selenocysteine lyase [EC:
4.4.1.16
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel00450
Selenocompound metabolism
cel01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CELE_F13H8.9 (scly-1)
Enzymes [BR:
cel01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
CELE_F13H8.9 (scly-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
184440
NCBI-ProteinID:
NP_495258
WormBase:
WBGene00017442
Ensembl:
WBGene00017442
UniProt:
Q19434
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Position
II:complement(6279676..6281102)
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AA seq
387 aa
AA seq
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MASNFIKIYLDNNATTPLDDRVKSAITDALDLWANPSSNNENALKAADAILEARSHLGKM
FNVDGECVVFTSGGTESNNWVIEGTIRNAKKVSKLPHIITTNIEHPSILEPLKRREEDGE
ISVTYVSINPLTGFVTSQSILDALTSDTCLVTIMLANNDTGVLQPVSEIFQAIREKLKTN
VPFLHSDVAQAAGKIPVNVRSLSADAVTVVGHKFYGPRSGALIFNPKSKRIPPMLLGGNQ
ESGWRSGTENTPMIVGLGEAAKVYNEGFLNIESILRQNRDYFEELLLKRLRNSHIIHFIG
SQRLPNTSSVAFLDYPSHGCDLLEKCQTFNASTGAACHKNECSPILKACGIPFAVASKTV
RISFGRSTKIAEIETVVDELVQLCSPS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcatctaattttataaagatctacctagataacaatgcaactactccattggatgat
agagtaaagtctgcaataactgatgctctagatctatgggcaaatccttcgagtaataat
gaaaatgcattgaaggctgctgatgcaattctagaagcaagaagtcatctcggaaaaatg
ttcaatgtagatggagaatgtgttgtattcacttctggtggtacagaatctaataattgg
gttattgaaggaactataagaaatgctaagaaagtttcaaaacttccacatattatcact
acaaatatcgagcatccgtcaatattggaaccattgaagagaagagaagaggacggagaa
attagtgtcacatatgtctctataaaccctttgactggttttgttacttctcaatcaatt
cttgatgcactgacatccgatacttgtctggtaacaataatgttggcaaacaacgatact
ggagttctccaacccgtatctgaaatctttcaagctattcgtgaaaagttaaaaaccaat
gtcccatttctccattctgatgttgcacaagctgcaggaaagatcccagttaatgttcga
tcgttgagtgccgatgcggttactgtagttggtcacaagttttatggaccgagaagtgga
gcgctgatttttaatccgaaatctaaaaggattcctccaatgttattaggtggaaaccaa
gaatctggatggagaagcggaactgaaaatactccgatgattgttggattgggagaagct
gcaaaagtttacaatgaaggatttttgaatattgagagtattctacgtcagaatagagat
tattttgaagaacttttactgaaacgacttcgaaactcgcacataattcattttattgga
tcccagagacttccaaatacatcaagtgtggcttttctggattatccatcccatggctgt
gatctgctggaaaaatgtcaaacattcaacgcttcaactggtgcagcttgtcacaaaaac
gagtgtagtccaattctcaaagcttgtggaattccgtttgcagttgcgtccaagactgtc
agaattagttttggaagatcaacaaaaatagctgaaattgagacggttgtggatgagctt
gtgcagttgtgctccccgtcttaa
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