Caenorhabditis elegans (nematode): CELE_F54E12.2
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Entry
CELE_F54E12.2 CDS
T00019
Symbol
F54E12.2
Name
(RefSeq) Transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_F54E12.2 (F54E12.2)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CELE_F54E12.2 (F54E12.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
178054
NCBI-ProteinID:
NP_502137
WormBase:
WBGene00010061
Ensembl:
WBGene00010061
UniProt:
G5EEW5
LinkDB
All DBs
Position
IV:complement(11333080..11336864)
Genome browser
AA seq
1091 aa
AA seq
DB search
MSSPRRTRIMFDTSSDDSQSDEKIDDFICRSSPQRQSKESDDQEDSVVDESMKSVNSPIV
NTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQNHESHDRSRSFVQYDENKP
LTPISKKLAESTDLRSKAQLRERLLRKSLKQNAEDSSPTRAASGGGWGSSADVKKSPEVS
TGLFETALSPIAKSDRRSSEYNSSTFLNVQKVATSTAINDIGGREEIVDESFPAPRTTAK
QDDSDIIEVTPEKVVSNEKRKSGIAINLDDSDIIDVTPVKTTSSRPPEPQRPRLPTSPIN
SEYAKLSYKELLAKKNKVMGLISLSLDLPDGGRRVIKQFQELDDEVERRKEMGLAEEIVD
DDEDDEIFVIEDDEPSHRQVAPKFPSGSVMTQNGLLPKRHIVDPLKAPQPDFNAMLEKDN
KKMMSGKMTDEKYKRIQLVSDRVVRQLAEATHTIPDETELTDTPKGFKLELMPHQKAGLT
WMRWRETQPQPGGILADDMGLGKTLSMISLIAHQKAARRARREDGNDDKDKEKRKVVKEQ
GLIPSNGTLIVAPASLIHQWDAEIDRRLDDSVLSTYMFHGTKKQRDIDARRLARYDVVIT
TFNLIANELIEKIRTKSKADDSSDGESDSNHTGIRRAVGKDDSVLAQICWSRVILDEAHT
IKNRQSLASKAVCRLSAFSRWCLSGTPIHNNLWDLYSLVRFLRIRPFSDDKYWKESIMPM
KPIMADRVNLLTKNLLLRRTKDQTCAVTNQKLVQLPPKNVEVHELELDGDEAQAYEIMME
AAKKFVKKLLQDSNDMKNHGFIPRRNRRAGKEGEVQNPFNFGPRDLAAGSNFEKMSCVLM
LLLRLRQACVHFNITKTGVDMDAFSLIGGDNAEEANVDDLNELLEKTMNMTLGNGDNEER
DKPRATTRIFDPDYLSCKIKNTLEIVENIMEKKEKVVIVSQWTSVLNLIEIHIKSSGFKY
TSITGQVLVKDRQERVDSFNREKGGARVMLLSLAAGGVGLNLTGGNHLVMVDLHWNPALE
QQAFDRIYRMGQKKDVFIHRLVTKGTIEQRVVMLQKDKVALASSVLDGNATRKMNKLTTA
DIKMLFGLNEK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgccacgtcgaacaagaataatgtttgatacatcttcagacgattctcaatca
gatgagaaaatcgatgacttcatctgccgatccagtcctcaacgccagtcaaaagaaagt
gacgaccaggaagattcagttgtcgatgagtcgatgaaatctgtaaattcgcctattgtc
aatacaccatcttcaacagcatcgcattgcacaaatagcttcgccacttcgacgccaaaa
tccaaatcgaatgcttcaacgagactcggttcttcatatggaagttccagaagctcctcg
caaaaccacgagagccatgatcgcagtcggagttttgtacaatatgacgagaacaagcca
ctgactccaatcagcaaaaaactggcggaatccactgatctgcgatcaaaagctcagctt
cgtgaacgtctcctccgcaaatcattgaagcaaaatgccgaggatagttcgccaacgaga
gctgcatctggaggtggatggggatcgtctgctgacgtcaagaaatcaccagaagtttcc
actggactttttgaaacagctctttctcctattgctaaaagtgatcgccgttcatcagaa
tataactcgagcacatttttgaatgtccagaaagtagctacttccacggcaataaacgat
attggcggaagagaagaaatagttgatgaatcatttcctgcacctcgaacaacggctaaa
caagatgatagtgacattatcgaagtgactccagagaaagttgtttcgaatgaaaaacgg
aaatcagggattgccattaacttggatgatagcgacattattgatgtaacaccagtaaaa
acaacttcatcgagaccaccagagccacaacgtccacgactgccaacttcgccaattaac
tcggagtacgcgaagctttcctacaaagagcttttggcgaaaaagaataaagttatggga
ttaatttcgttatcattagatctacctgatggtggcagacgggtaattaaacaatttcaa
gagcttgatgatgaagtggagagaagaaaagaaatgggacttgctgaagagatcgtcgac
gatgatgaggatgatgaaatcttcgtgattgaagatgatgaaccgagtcatcgacaggtg
gctccaaagttcccttccggatctgtcatgactcaaaatggtttgttgccaaaaagacat
atcgtggatcctctcaaagctcctcagccagacttcaatgccatgttggagaaggacaac
aagaaaatgatgtctggaaagatgaccgatgaaaaatacaaacgcatacaactcgtttct
gatcgagtagttcgacaacttgctgaggccactcacacaatccccgatgaaactgagctc
acggacactccgaaaggattcaaacttgaactgatgccacatcaaaaggcaggcctaacc
tggatgcgttggagagaaactcaaccacagcctggtggaattcttgcggatgatatgggt
ttaggaaagacgctttcgatgatttctctcatcgcccatcaaaaagctgctcgtagagct
cgcagagaagatggaaatgacgataaagacaaagaaaaacgtaaagtggtaaaagagcaa
ggactaattccgtcgaatggaacattgattgttgctcctgcaagtttgattcatcaatgg
gatgctgaaatcgatagaagactagatgacagcgttctatcgacatacatgtttcatggc
acaaaaaagcagagggacatcgatgcaagacgtcttgctcgatacgatgtcgtcatcacc
acgttcaatcttatcgcaaatgaattaatcgaaaaaataaggactaaatcaaaagcagat
gattcatctgacggtgaatcggattcaaatcatactggaattcgtagagcagttggaaaa
gacgactccgttcttgctcagatctgttggtctcgagtcattcttgacgaggcgcatacc
atcaaaaatcggcagtctcttgcttcgaaagctgtctgtcgtttatcagcattctctcga
tggtgcctttctggaactccgatccataacaatctctgggatctttacagtctcgttcga
ttcttgcgtattcgtccattcagtgacgataaatattggaaagaatcgatcatgccaatg
aaaccaataatggctgatcgcgtaaatttgctcacaaagaacctgcttcttcgtcgtaca
aaggatcaaacatgtgctgtgacaaaccagaaactagttcagttaccaccgaaaaatgta
gaagtccacgaattggagttggacggagatgaagcacaggcttatgagattatgatggag
gctgccaaaaaattcgtcaaaaaacttctgcaagattccaatgatatgaaaaatcatgga
tttattcctcgtcgcaatagaagagcaggaaaggaaggagaagttcagaatcctttcaat
tttggtccacgtgatttggcagccggctcgaacttcgaaaagatgtcatgtgttttgatg
cttcttcttcgtcttcgacaagcttgtgttcatttcaatatcacaaaaacaggagtcgac
atggacgctttcagcttaatcggtggagacaatgcggaggaagcgaatgtggacgatttg
aatgagttactggagaaaactatgaacatgacgttgggaaatggtgacaatgaagaaaga
gacaaaccgagggctacaacacgaattttcgatccggactacctgagctgtaaaattaaa
aatacacttgaaattgttgagaacattatggagaagaaagagaaagttgtcattgtttct
caatggacatcggttctcaatttgatcgaaattcacataaaatcaagtggtttcaaatat
acatcaattaccggacaagttctggtcaaggatcgtcaagagagagtggacagctttaat
cgggagaaaggtggtgctcgagttatgcttctctctctggccgcgggaggtgttgggctc
aatctgacaggtggaaatcatttagtgatggtggatttgcattggaatccggctctcgaa
cagcaagctttcgatagaatttatcgaatggggcagaagaaggatgttttcattcataga
ttggttacgaaaggaacgatcgaacaacgagttgtaatgctgcaaaaggacaaagtcgcg
ctagcttcgtctgttctcgacggaaatgctactcgcaagatgaacaaattgacgacggca
gatatcaagatgctgttcggattgaatgaaaaataa
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integrated database retrieval system
