Caenorhabditis elegans (nematode): CELE_F30A10.8
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Entry
CELE_F30A10.8 CDS
T00019
Symbol
stn-1
Name
(RefSeq) Syntrophin-1
KO
K24064
beta-syntrophin
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
CELE_F30A10.8 (stn-1)
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Motif
Pfam:
PDZ
PH
PH_17
PDZ_6
PDZ_2
DUF3123
Motif
Other DBs
NCBI-GeneID:
266844
NCBI-ProteinID:
NP_492521
WormBase:
WBGene00006062
UniProt:
Q93646
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Position
I:9501268..9505173
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AA seq
440 aa
AA seq
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MAAVRSGLVDIFVQGQWHRVLATLDPTAITLQTMEQNEAEAEKRTVRVVKYDGNGLGISI
KGGRDNNMPIVISKIFKGMAADQAGELFLDDVIISVNGENLLDASHEEAVRALKRAGRVV
DLQVQYRREDMMHRENIVENVEWDDDIRERVRTIGLKLAYVARAGIDADAEGRILEMRSP
SGRYSLAMRCSSSEEADGWFEALHACTTCLLTQALAQVNIMLGNNPQVRHMGWIAEQVSE
NGISMWKPKFMTLTNSEILFYEAVPQLKAEWAEPRLVRPLVATRVVQTSSRTAPVIKGLT
DVISFRMRTGTQQGVRTHTIRVETHAELARWVRAVVIGGYEACLSTSQVSAPCLWRGESC
ELIVNLDNGISLLSSTGEVLWQHSFETIRATGDDGGRFLWVDFGPPHGEQELDLLNSAKP
VVFILHSFLATKVYRLGLYA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgttcgatccggcctggtcgacatttttgttcagggacaatggcatcgtgta
ttggctactctcgatccaactgctatcacattacaaacaatggagcagaatgaggctgaa
gcagagaaacggacagttcgagttgtgaaatatgatggaaatggattaggaatttcaatt
aagggaggcagagacaacaacatgcctattgtgatcagcaaaatcttcaaaggaatggca
gcggatcaggctggagaactatttcttgatgacgtcattatctctgtgaatggagaaaac
cttctcgatgcttcacacgaagaagctgtaagagcattgaaacgagctggacgggttgtt
gacttgcaagtacagtatagaagagaggatatgatgcatcgggaaaatattgtggaaaat
gttgaatgggatgatgatattcgggaacgagttagaacaattggtttaaagcttgcatat
gtggcaagagctggaatagatgcagatgcagaaggtagaattctagaaatgagaagtcca
tcaggaaggtattccctagcaatgagatgttcaagtagtgaagaagcagatggatggttt
gaagctttacatgcctgtaccacgtgtcttctgactcaggcactggctcaagtcaatata
atgctcggtaacaacccccaagtgagacatatgggttggattgcagaacaagtatcagaa
aatggaatttcaatgtggaaacctaaatttatgacgcttacgaatagtgagatcttgttc
tatgaagctgttccacagctgaaagcagaatgggcagagccaagactagtacgtcctctg
gtggcaacaagagtcgttcagacaagttctcgaactgcgccagtaattaaaggtctcact
gatgtgatctctttccgtatgagaactggaactcaacaaggtgttcggacacatacgatc
cgggtagaaactcatgcagaactggcacgatgggttcgtgcagtagtgatcggtggatat
gaagcatgtctttctacatctcaagtctctgctccttgtctttggcgaggcgaatcatgc
gaactaatagttaatctagacaatggaatatcattactttcgtcgactggagaggtactg
tggcaacattcgtttgaaacgattcgcgccaccggcgatgatggtggtcgttttctctgg
gtcgattttggaccaccacatggtgaacaggaattggatttgctaaattccgcaaagcca
gtcgtgttcattcttcattcatttctcgccaccaaggtgtatcgattaggattgtacgcg
tga
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