Caenorhabditis elegans (nematode): CELE_C36B1.5
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Entry
CELE_C36B1.5 CDS
T00019
Symbol
prp-4
Name
(RefSeq) Pre-mRNA processing factor 4 (PRP4)-like domain-containing protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_C36B1.5 (prp-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_C36B1.5 (prp-4)
Spliceosome [BR:
cel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
CELE_C36B1.5 (prp-4)
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Ortholog
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GFIT
Motif
Pfam:
WD40
PRP4
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
Cu-oxidase_2
Motif
Other DBs
NCBI-GeneID:
183250
NCBI-ProteinID:
NP_492363
WormBase:
WBGene00007972
Ensembl:
WBGene00007972
UniProt:
Q93339
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Position
I:complement(8733413..8735717)
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AA seq
496 aa
AA seq
DB search
MAENGNFAVPAPPRQFGSLANAESVNAILNAQQQNHGPTVSLERMEVSNQADSRHDAEMF
AEFDRRRRARTLTLPTDDVQVKLKLRALNQPICLFGEDALDRRERLRALLSTMSEDEIAA
VLHTDEVNADKADEETVTWYHRGPIELRMARVSIADFSLRKAKLRLDKAREEAARPAHEK
ALARQEAHKWVQQINLHASQVADTRPVAFCEFSADSEHIVTAGWSGSVAVWKREQCAQEI
KFIGHSSQAGCARFHPGAFTQNDYSSLNVVSCSYDGTVLLWSLSQESPIGELEQHPQRVS
KVAFHPNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDC
YGRVWDMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPA
HTSVVTRVRADAAGQYLVSASFDCTLKMWSTTGWQPLRQLQGHDTRILCVDISPDGQWMC
SSAFDRTFKLWAQSDY
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatggcaattttgctgttccagcaccgccaagacagtttggatcactggcg
aatgcagaaagcgtgaatgcaatcttgaatgcacaacagcaaaaccatggacccacagtg
tctttggaacgaatggaagtatcaaatcaagcagattcacgccacgatgctgaaatgttt
gcagaatttgatagaagacggagagcaagaactctcacattgccaacagatgatgttcag
gtaaaactgaaacttcgtgctctaaaccaaccaatttgtttgttcggagaagatgcattg
gatagaagagaaagacttagagctctactttcaacaatgtctgaagatgaaattgcagcc
gttttgcatactgatgaagtgaatgctgataaagcagacgaagaaaccgttacttggtat
catcgtggtccgattgaacttcggatggcacgcgtttcaatcgctgatttttctctaaga
aaagctaaattaagacttgacaaagctcgagaagaagctgctcgccctgctcacgaaaaa
gctttggctcgtcaagaagctcacaaatgggttcaacaaatcaatcttcatgcttctcaa
gttgcagacacacgccctgtggctttttgtgaattttcagcagattctgaacatattgtt
accgctggctggtccggatcagtggcagtttggaagcgagaacaatgtgctcaagaaatt
aaatttattggacattcatctcaagcagggtgtgcacgttttcatcccggtgcatttact
cagaatgattattcttctttgaatgtggtttcgtgttcgtatgatggaaccgttcttcta
tggtcgctaagccaggaatcaccaatcggagaactagaacaacatccacaaagagtatct
aaagttgcgttccatccaaatggtcatcatctcgctactgcatgcttcgattccacgtgg
agaatgtacgacttgacaacgaaaaaagagttactttatcaagaaggacactcaaaatca
gtagctgatgtggcattccatccagatggatcagtcgctctaactggcggacacgattgt
tatggaagagtttgggatatgcgaactggaagatgtattatgttccttgatggtcacaca
aaagaaattcacagtgttgaatggatgccaaatggttatgaaatgattactggaagctcg
gacaattcaatgaaagtttgggatcttcggatgagacgaaatacatacactatgccagct
catacatcagttgttacccgggtgcgtgctgatgctgctggccaatatcttgtttctgcc
agcttcgattgtactcttaaaatgtggtcgaccactggatggcaaccactaagacaactt
cagggtcacgatactagaatcctgtgcgtagacatcagtccagatggacaatggatgtgc
tcatcggcatttgatcgtacatttaaattatgggctcaatctgattattga
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