Caenorhabditis elegans (nematode): CELE_Y87G2A.5
Help
Entry
CELE_Y87G2A.5 CDS
T00019
Symbol
glp-4
Name
(RefSeq) Valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CELE_Y87G2A.5 (glp-4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cel01007
]
CELE_Y87G2A.5 (glp-4)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cel03016
]
CELE_Y87G2A.5 (glp-4)
Enzymes [BR:
cel01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
CELE_Y87G2A.5 (glp-4)
Amino acid related enzymes [BR:
cel01007
]
Aminoacyl-tRNA synthetase
Class I (U)
CELE_Y87G2A.5 (glp-4)
Transfer RNA biogenesis [BR:
cel03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CELE_Y87G2A.5 (glp-4)
Prokaryotic type
CELE_Y87G2A.5 (glp-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
173224
NCBI-ProteinID:
NP_493377
WormBase:
WBGene00006936
Ensembl:
WBGene00006936
UniProt:
Q9U1Q4
LinkDB
All DBs
Position
I:complement(13548074..13559361)
Genome browser
AA seq
1050 aa
AA seq
DB search
MSDPAGNRPKTEKELKKEAEKAAKLAKFEEKQKKLAEKKAAASDKPVKEAKAKKEQTVEA
AEPVDQTPTGQRKKIDGEIPAAYFPGYVESGWYSWWEKEGFFKPEYIDKLNPGSNPADSF
TVCIPPPNVTGNLHVGHALATTVEDTITRFNRMHGKRTLFNPGCDHAGIATQVVVEKRLK
RERGLTRHDLGRDRFNQEVWHWKNEKGDVIYDQFRKLGASVDWDRAVFTMDPKMCRAVTE
AFIRMHESGTIYRSNRLVNWSCALRSAISDIEVDKKELTGSTLIAVPGYDKKIEFGVLNS
FAYKIQGSDEEIVVSTTRIETMLGDSGVAVHPDDQRYKHLVGKQCIHPFIPTRNLPIFAD
SFVEMEFGTGAVKITPAHDHNDYEVGIRQNLPFHNCITDDGLISQGCGEFSGMKRFDART
AVIEALKEKGLYRGKEDNPMVVPTCSRSKDVIEPILKPQWYVKCAHMAEKAVAAVANGDL
QIIPEFHKATWNRWLESSRDWCISRQLWWGHRIPAYYISFADGREQPLPEENYWVSARTE
QEALAKAAQKFQVPEAEILLKWDEDVLDTWFSSGMWPFAVFGWPDATKDMDLFFPGAVLE
TGHDILFFWVARMVFMAQELTGKLPFKEILLHAMIRDAHGRKMSKSLGNVIDPLDVIRGI
SLNDLQAQLLGGNLDEKEIAVAKEGQARDYPDGIPECGVDALRFALLSYTSQGRDINLDV
LRVHGYRKFCNKLWQVVRFALARISDKPEQKPTFEINLKSATPTDLWILSRLAKAVKETN
EALKAYNFTQATTVTYNFWLYDFCDVYVETIKPVLYGDNTTLRQVAISVLHKCIDTGLRL
ISPLMPFISEELWQRMPRLDDSDYTSPSIIVAQYPLTQKYEKYQNEKLEAAFEFAQELIG
KVRSLRADYDLKKTKITMQILSETPEDESMLNDISAVITTLTFSEKVSILNKCESDKIEK
GSAHIACGGRCQVYINLTGIIDVPKEIEKLGAKLQKNQISVKKIGDIQSSADYEQKVPVD
IRALDQEKKATLEKEIENITAAIAQLKALN
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccccgcaggaaaccgtccgaagacggaaaaagagctgaaaaaagaggcggag
aaggcggcgaaactcgcgaaattcgaggaaaagcagaaaaagcttgccgagaagaaggct
gccgcaagtgataagccggtgaaggaggccaaggccaaaaaggagcaaactgtggaagcg
gcggagcctgtagatcagactccaactggtcagaggaagaaaatcgacggagaaatcccc
gcggcctacttcccaggatacgtcgaatccggctggtactcttggtgggaaaaggaggga
ttcttcaagcccgagtacattgacaagctgaatccaggctcgaatcccgccgactcgttc
acagtttgcattccaccaccaaatgtgacaggaaatctacacgttggacacgcgctggcc
actaccgtcgaggatactatcaccagattcaacagaatgcacggaaaacggacacttttt
aatccgggatgtgatcatgctggaatcgcaacgcaagtcgtcgtcgagaaacgtctgaaa
cgagaacgtggattgacacgtcacgatttgggacgggatcgattcaatcaagaagtttgg
cactggaagaatgagaaaggggatgtgatttatgatcaattccgaaaactcggcgcctct
gtcgactgggatcgtgccgtttttacgatggatccgaaaatgtgccgggctgtaacggag
gcttttattcgaatgcacgagtctggaactatttacagatctaatagacttgtcaattgg
agttgcgcgctgagatctgcgatttctgacatcgaagtggacaagaaagagctaaccgga
agcacactgatcgccgtgcccggatacgataaaaaaatcgaattcggcgtgctcaactcg
ttcgcctacaagattcaaggatccgacgaggagattgtcgtctccacaacacgtatcgaa
acaatgctcggagattcaggagttgctgttcatccagacgatcagagatacaagcatctc
gtcggaaaacagtgtattcatccattcatccccacccgaaacctcccgatctttgccgac
tcattcgtcgagatggaattcggaaccggagcggtaaagatcactccagcacacgatcat
aatgattatgaagtcggaattcgtcaaaaccttccattccacaattgtatcacagatgat
ggtctgatctctcagggatgcggggaattctccggaatgaagagattcgacgccaggacc
gccgttattgaggctctcaaggagaagggtctctaccgtggaaaagaggataatccgatg
gttgtgccgacgtgttctagatccaaagatgtcattgagcctattctcaagcctcaatgg
tatgtcaagtgtgctcatatggcagagaaagccgtcgccgctgtcgccaacggtgatcta
caaatcattccggaattccataaagccacgtggaatcggtggttggagtcgagcagagat
tggtgtatctctaggcagctatggtggggacaccggatccctgcatactatatctcattt
gccgacggaagagaacaacctctgccagaggagaattattgggtctcggcacgaactgaa
caggaggcacttgccaaggcggcacagaaattccaagttcctgaagcggagatcctgctg
aaatgggatgaggatgtgcttgacacgtggttttcgtctggaatgtggccgtttgcagtt
tttggatggcctgatgccacaaaggatatggatttattcttccctggtgctgtgttggag
actggacatgatattctcttcttttgggttgcaagaatggtttttatggctcaggagttg
actggaaaacttccgtttaaagagatcctgctacacgcaatgatccgagatgcccatgga
cgtaaaatgtcaaaatccctcggaaatgtgattgatccactcgatgtgattcgtggaatc
tctctaaacgatcttcaagctcaacttctcggcggaaatctcgacgaaaaagagattgca
gttgcaaaagaaggacaagcacgtgattatccagatggaattcctgaatgtggtgtagat
gctcttcgatttgcactactttcctatacatcacaaggaagagatattaatttagatgtt
ctcagagttcatggatatcgaaaattctgtaataagctctggcaagttgtgagattcgcg
ttggcacgaatttctgataaaccggaacaaaaaccaacgttcgagattaatctgaaatca
gctacacctactgatctatggattctatcaagactcgcaaaagctgtcaaagagacgaat
gaggcattgaaggcatataacttcactcaggcaaccactgttacctacaatttctggtta
tacgacttctgtgatgtttatgtcgaaactatcaagcctgtgctttatggagacaacacg
actctccgccaggtggcaatttccgtccttcacaaatgtattgatacaggacttcgtctt
atttctccattaatgccattcatctcagaagaattatggcaacgtatgccacgtctcgac
gattcggattacacgtcaccatcgattattgttgcacaatatccattaacacagaaatat
gaaaaatatcaaaatgagaagctggaggctgcattcgaatttgcacaggagctcattgga
aaagtccgatcgttgagagctgattatgatttgaagaagactaagattactatgcaaatt
ctctccgaaacaccagaagacgagtcaatgctcaatgatatatctgcagtgataaccacc
ttaacattcagtgaaaaagtctcaattctcaataaatgtgaatccgataaaattgaaaaa
ggttctgcacatattgcttgtggaggacgttgtcaagtatacatcaatttgactggaatt
atcgatgttccaaaagaaatcgaaaagctcggagccaaattgcaaaagaatcagatttct
gtgaaaaagattggagatattcaatcgagtgctgattatgagcaaaaagttccagttgat
attcgtgctctggatcaggaaaagaaagcaaccctggagaaggaaatcgaaaacatcact
gcggcgattgcacaactcaaggctctcaactaa
DBGET
integrated database retrieval system
