Caenorhabditis elegans (nematode): CELE_F42A9.2
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Entry
CELE_F42A9.2 CDS
T00019
Symbol
lin-49
Name
(RefSeq) Protein lin-49
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_F42A9.2 (lin-49)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
CELE_F42A9.2 (lin-49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PHD_2
EPL1
PHD
SLX1_C
Motif
Other DBs
NCBI-GeneID:
177666
NCBI-ProteinID:
NP_501475
WormBase:
WBGene00003034
Ensembl:
WBGene00003034
UniProt:
Q20318
LinkDB
All DBs
Position
IV:8620683..8626162
Genome browser
AA seq
1042 aa
AA seq
DB search
MGRGRGVAIQETIEECRDTISDRIQYNLGLNESKVVLMDIVTGPNQNVSLQERTKRWMAV
SVDARMTKFKKNFYPTNQKNSKNISKDLDPPIQRVDAHIVTPVAGKCGMPLQKFPEFKHD
HEKIKIERDAKYVDYSVDEFDMSWMSIMNAKRTKLGLEIFSVAIYEHWVDRLEKMCIWKP
KEFHKLKDENGEELDDVCNICLDGDTSNCNQIVYCDRCNLSVHQDCYGIPFIPEGCLECR
RCGISPAGRVNCVLCPSTTGAFKQVDQKRWVHVLCVIWVDETHFGNTIFMENVQNVEKAL
HDRRALSCLLCKNRQNARMGACIQCSETKCTASFHVTCARDSGLVMRINETEDGQVNRFV
WCPKHAPPLTDADREMRQLMLRNARRENERKGPMISMPTLMKSMISTICVERPFSDYSEI
IYFWYEKRLNRLGAPLLKNFTQGASKSRRLLPKSTICGQLKNVETCEMKKQVNAVKESLA
SGLEIFDMIVRREERKKDMLNSYIRMFERGFKPTELLCQEVIEALKTIDAGKVFAEPVEL
VGYTDIIENPICLKDMSEKAASGKYSTVAALSADVQLMLSNCATFNKGNRVYIKYGNTYR
KDSTPILEIAEKEEVERLALKTDEKFMTQLLNGVMVEYNGWAQSRNEVAKEIPPPTPSRG
RGTGRRRQNPFLDVQELDTDDSKDSSALSEIPGSSKKSSRKRGIQDTKMEEDEEIKPSTS
GTNAVASVPLLSSSRESKNKSKSSDADVSSPKSSWLGSPSTSQNLRRRVQGFSGNESSPK
VHKKLSTDNPSNSNLRQTTLTNFFGTNPKTQQQVTFADMTATPSGSGNKNVSQRSLFDTP
STSKASSFTSLSSTRPSTRSTSIIPTINKKNAFRMSSASIQSPLPTTKKIGVRAMATDDE
EEDIVIQPPPKEMTTQELEAEKLKSAENEAMSKFAHNQLVIVDGRAAKVIESRLAHLASD
IHHEQRQSMMKKRREVLSEIPQAAVIYVEFFQKSNTLENFQWVTPDKVELLDLNNIGQRS
PKIPGLKAAKEWHQKVLNGEDV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggggcggggacgtggagttgccattcaggagactattgaagaatgtcgtgacacgatt
tcggatagaattcagtataatcttggtttgaatgaaagcaaagttgttctaatggatata
gttactggtccaaatcaaaacgttagtttacaagaaagaactaaaagatggatggcagtg
tctgtggacgcaagaatgacaaaattcaaaaagaatttctacccaacaaatcaaaaaaat
tccaagaatatttcgaaagatctcgatccacctattcaacgagtagatgcacatattgta
actccagtggctggaaaatgtggaatgcctcttcagaaatttcctgaattcaaacacgat
cacgagaaaatcaagatcgaaagggatgcgaaatacgttgactattcagtcgatgaattt
gacatgagttggatgtctattatgaacgcgaaaaggacaaaattgggtctcgaaatattt
tcagtcgcaatttacgaacattgggtcgatcggctggaaaaaatgtgcatttggaagccg
aaagagttccataagctgaaagatgaaaacggagaggaacttgatgatgtctgtaacatt
tgccttgatggagatacatcaaattgcaatcaaatcgtttattgtgatcgttgtaacctg
tcagttcatcaagattgttatggtataccattcataccagaaggatgtcttgaatgtcga
agatgtggaatatcaccagcaggtcgtgttaattgtgtgttatgtccatcaacaactgga
gcatttaaacaagttgatcaaaagagatgggttcatgttctctgtgtcatttgggtcgat
gaaacacattttggaaatacaatttttatggaaaatgtgcaaaatgttgagaaagcatta
catgatcgtcgtgctctcagctgcctcctgtgcaaaaatcgacaaaatgctcggatggga
gcctgtattcaatgctccgagacaaaatgtactgcttcattccatgttacatgcgctaga
gacagtggtctagtgatgcgaataaatgaaacagaagatggacaagttaatcgatttgta
tggtgtccaaaacatgctccaccgctcactgatgccgatcgagaaatgagacagttgatg
ttaaggaatgctagacgagaaaatgaaagaaaaggacctatgataagtatgccaactttg
atgaaatcaatgatttcaacaatctgcgtcgaacgtccattctctgattactctgaaatc
atctatttttggtacgaaaaacgattgaatcgactcggagcgcctcttctcaagaatttt
acgcaaggtgcatcaaagtcacgcagacttttacccaaaagtacgatttgtggtcaattg
aagaatgttgaaacttgtgaaatgaagaaacaagtaaatgcagtgaaagagtcattagcc
tctggattggaaatttttgatatgattgttcgacgagaagaaaggaaaaaggatatgctg
aactcgtacatcagaatgtttgaacgtggtttcaaaccgaccgaactgttgtgtcaagaa
gttatcgaagctttgaaaacaatcgatgctggaaaagttttcgcggagccggttgagctt
gtaggctatactgatatcatcgaaaatccaatttgcctgaaagatatgtctgaaaaagct
gcatctggcaaatattccaccgttgctgcactgtccgctgatgttcaactgatgctctca
aattgtgccactttcaataagggaaatcgtgtttatattaagtacggtaacacataccgg
aaggacagtactccgatcttagaaatcgctgaaaaagaagaagtcgagcgattagcgttg
aaaaccgatgagaagtttatgacacagttattgaatggagttatggttgagtacaacgga
tgggcacaatcacgaaatgaagtagctaaagaaattccaccaccaacaccgtcaagaggc
agaggcacaggaagacgtcgtcagaatccatttttagatgttcaggaattggataccgat
gattctaaggattctagcgcactttcagaaatacctggaagctctaagaagtcgagcagg
aaacgtggaattcaggatactaagatggaggaagacgaagaaattaaaccatcgacatct
ggaacaaacgcagtggcgtctgtgccgttgctctcatcgtccagggagtcgaaaaataaa
tctaaatcttctgatgcagacgtctcaagcccaaaatcatcttggcttggatcgcccagc
acttctcagaatttgcgacgacgtgtccaaggattctcgggaaatgaatcatctcccaaa
gttcacaagaaattatcaacggataatccatcgaacagtaaccttcgtcagacgacgtta
accaattttttcgggacaaatccaaagacacagcaacaagtgacatttgcagatatgaca
gcgacaccttcaggaagcggaaataaaaatgtttcacaaagatctctatttgacactcca
agtacctccaaagcttcatctttcacatctctatcatctactcgcccttcaaccagaagt
acttctattattccaactatcaataagaaaaatgcattccgaatgtcatcagcatctatt
caaagtccattgccaacgacgaaaaagattggagttcgagctatggcaactgatgatgaa
gaagaagatatagttattcaacctcctccaaaagaaatgacaactcaagaattggaagct
gaaaaactgaaatcagctgaaaatgaagctatgtcaaagttcgcacacaatcaattggtt
attgttgatggaagagctgcaaaagtaatcgaatctcgacttgctcacttggcttccgat
attcatcacgaacaaagacaatcaatgatgaaaaagcgtcgggaagtactctctgaaatc
cctcaagccgcagttatttatgtggaattctttcaaaagtcgaacactttagagaatttc
caatgggtgacgcctgacaaagtggaacttctcgatttgaataatatcggccaacgatca
cctaaaattcccggtttgaaagctgcaaaagagtggcaccaaaaagttctcaacggcgaa
gatgtctaa
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