Caenorhabditis elegans (nematode): CELE_Y113G7B.23
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Entry
CELE_Y113G7B.23 CDS
T00019
Symbol
swsn-1
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CELE_Y113G7B.23 (swsn-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_Y113G7B.23 (swsn-1)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_Y113G7B.23 (swsn-1)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CELE_Y113G7B.23 (swsn-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CELE_Y113G7B.23 (swsn-1)
PBAF complex
CELE_Y113G7B.23 (swsn-1)
GBAF(ncBAF) complex
CELE_Y113G7B.23 (swsn-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM-assoc_3
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
180324
NCBI-ProteinID:
NP_001256906
WormBase:
WBGene00004203
Ensembl:
WBGene00004203
UniProt:
G5EF87
LinkDB
All DBs
Position
V:complement(<20239182..>20249488)
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AA seq
789 aa
AA seq
DB search
MKKGASKRRRDDDDGDVSMTGDDDDSRSGAAVKVEVPKGKEKDAEFSAPKGQKLTDLDEE
GVQSTKEAPQLAEGNVIEQTHYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDV
YVAYRNFMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNYQVDSDARPA
PVAPPPTSHFMVLADTPTGIQPMNPPGKESAGASGEPPKEEIKTEIESISTPGLKIDQYQ
KQAIAMRTKGAPPGRDWTEQETCLLLEALEMFKDDWNKVCDHVGTRTQHECVLKFLQLPI
QDPYLTENLSSDKAEAAPGGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAA
AATKAAMEEFGKLKEEIPPLVAEAHEKNVAAMAEKTGQVDGAVGLTKSGLKPAEEAAGDS
DEKMDTNTNDDVPSTTEAKSAIDKGVQAAAASCLAAAAVKAKHLAQIEERRIKSLVAQLV
ETQMKKLEMKLRHFDELEQIMDKERESLEYQRHQLILERQAFHMDQLKYLENRAKHEAHS
RMTSSGALPAGLPPGFEVTGPPQPTPQVQISAQEAAIPEKMDTSEAATAARPPSTPQAPQ
APPVQAAPAPVQAPQAPQAPPQAYQGYGGPGGPPQQAYRYPPQQGQQYSPYPPPQQQQQH
QAQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPY
PGPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPPPHGQYQPQQQQGGPMGPPGGHHEGGD
GGDSQQKQE
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagggagcgtcgaagcggagacgcgacgacgatgacggtgacgtttcgatgacc
ggcgacgacgatgatagcagaagtggtgccgctgtgaaggttgaagtgccgaaaggaaag
gaaaaagacgccgaattcagcgcaccaaaaggccaaaagctcactgatctcgacgaagaa
ggtgtccaatcaacaaaagaagctccacaactcgccgaaggaaacgtcattgagcagacc
cactacattgtagtcccctcatacgccggctggttcgactataacgcaattcatcaaatc
gagaaacgcgcaatgcctgaatttttcaacggaaagaataagagcaagacaccggacgtc
tacgttgcctaccgtaattttatggtcgacacgtaccgtctgaatccatttgaatacgtg
tctgcgacggcttgtcgccggaatttggccggtgatgtgtgctcaattgtgcggcttcac
tcgtttctcgagcaatggggcctgctgaattatcaagttgattcggatgctcggccggct
cctgttgctccgccaccaacaagccattttatggttttagctgatacaccgactggcatt
cagccaatgaatccacctggaaaggagtctgctggagcatctggggagccaccaaaagag
gagattaagactgagattgagtccatttcgacgcccggcctgaaaattgatcagtatcag
aagcaggccatcgcgatgagaacaaaaggagccccaccaggccgtgattggaccgaacag
gagacgtgtttgctgttggaagcattggaaatgtttaaggatgactggaataaggtttgc
gaccacgtcggcactcgaactcaacacgaatgtgttctaaaattccttcaactcccaatt
caagacccatatctaactgaaaatctgtcgtcggataaagctgaagcagctcccggcgga
gcagccaaagaagtactcggaccacttgcattccagcctgttccattttctcaatctgga
aatccagtaatgtcaactgtggcttttctggcatcagttgtggatccacaagtggccgct
gcagctacaaaagctgcaatggaagaatttggaaaattgaaagaagaaattccgccgctt
gtagctgaagctcatgagaaaaatgttgcggcaatggccgaaaagactgggcaagttgat
ggagctgttgggcttacgaaaagtggcctaaagcctgctgaagaggccgccggagattcc
gatgaaaaaatggataccaataccaacgacgacgttccatcaacgaccgaagcgaaatca
gccatcgataaaggagttcaggctgcggctgcctcatgcctagccgccgccgccgtaaaa
gccaagcatctggctcagattgaggaacgccgtatcaaaagcctcgtcgcacagcttgtc
gagactcaaatgaagaagcttgagatgaagcttcgtcattttgacgagctcgagcagatt
atggataaggagcgggaatcgttggaatatcaacggcatcagttgattcttgaacgtcag
gcttttcatatggatcagcttaaatatctcgagaatcgggctaaacatgaagctcattct
cggatgacaagctctggagctcttccggctgggcttccacctggatttgaggttaccggc
ccgccacagcctactcctcaggtgcagattagtgctcaggaggctgcgattccagagaag
atggatacttcggaagcagcgactgctgctcggccaccgtccacaccacaggctccgcaa
gctccccccgttcaggccgctccggcgccggttcaggctcctcaggctccacaggctcca
ccacaagcctaccaaggctatggagggcctggagggccccctcaacaagcctaccgctac
ccaccacaacaaggccaacaatactcaccatacccaccaccccaacaacaacaacaacat
caggctcagcaggcccagtctcaggctcactatggcccaccgggtggaggacaaggccca
ccaccaccaccacaaggccagcaatactatggagggccgccgccaccgggccagccgtac
gggccgccaggaggctatccgccacagcagcagaggccaccatatcaggctcaaccgtat
ccgggcccgccgccgcctcagcagcagaggggatatggttatccaccaccaccgcagcca
ggacacccataccagcagccatatggtcaaatgccaccaccaccacacggacaatatcaa
ccacagcagcagcagggaggtccaatgggaccacccgggggacatcatgaaggtggagac
ggtggagattcacaacagaaacaggaataa
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integrated database retrieval system
