Caenorhabditis elegans (nematode): CELE_C04G2.6
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Entry
CELE_C04G2.6 CDS
T00019
Symbol
dis-3
Name
(RefSeq) putative exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CELE_C04G2.6 (dis-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_C04G2.6 (dis-3)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
CELE_C04G2.6 (dis-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
Rrp44_S1
CSD2
OB_RNB
Dis3l2_C_term
Motif
Other DBs
NCBI-GeneID:
177875
NCBI-ProteinID:
NP_501835
WormBase:
WBGene00001001
Ensembl:
WBGene00001001
UniProt:
Q17632
LinkDB
All DBs
Position
IV:10097202..10106523
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AA seq
961 aa
AA seq
DB search
MDLNVKQSGIHSVALHTTYFQNRSGKVYKRAEERYLRNDLSCGLAQCGTCKDFGTNPLLK
IENPVRNAKVGRHALIVDSTSLIRFYDLFDSSLLRDLIVTQTVWEGVKAKAVPAYKKMNS
LCYEDAKDRFHVFMNEFHCETFSESSKFEDLSRGEELLLSTALYLKTHWQKHNVAPVVLV
FDEDSKKRMENHYQHVMYLKEYIQNLEDPGKQALLDQMAAYESSGNGNEKQIFDEYLSHD
RIMEGIASGTIKRGNFSVSRENYREATVIIDDQLTSWFITGNNCNRAVNGDTVAVQLLPE
DQWTAPEKKIRLRDVEEYVKTADDMGNEDEENDDENDEPKAKKSKKMTVSTAKVVGIIKR
NWREYCGMLLPSTVKGARRHLFCPAERLIPRIRIETEQAETLSQQRIVVAIDHWPRDSKY
PLGHYVRSIGEMGSRETENEVLLLEHDIPHAPFSESVLDCLPREEWEPDLTENRGPLPRV
DLRDLTICSVDPLGCTDIDDALHCKQIGEDLFEVGVHIADVTHFVRPGTAIDDEAALRGT
TVYLCDRRIDMLPCLLSSNLCSLRGEEERYAFSCIWTMTSSADIQSVKYHKSLIKSKAAL
TYEKAQEIIDDPKEQNDVALGLRGLMKLSKVLNARRTGNGALTLASSEVRFDMDWESRTP
KKVMEKQHLDTHSMVEEFMLLANISVAEKILEEYPDCALLRRHPVPLKESYKPLVEAARH
RGFEIIVESGKGLADSLNRCVDKKNPMLNRLLRMLTTRCMTQAVYFSAGTVPVPQYQHFG
LACAIYTHFTSPIRRYADVIVHRLLAAAIGADDIQSGLLNQARCTKICTNINYRHKQAQY
AGRASVQLNVVRYFKGKVETCEGFVMGVRNNGIQVFVPKYGLESIIVLQTSAASGTTIDV
EEMSVKVNGDVVIKELEPVTVRISVNEKNQQRPRVELQLIKPAIPGLSVDFDLSSSEGLG
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggatttgaacgtcaaacaaagtggaattcattccgtcgctttgcacacgacttacttc
caaaatcgctcggggaaagtctataaaagagccgaagaaagatatctacgaaatgatctt
tcatgtggacttgctcaatgtggaacctgcaaggatttcggcacaaatccgctgttaaaa
attgaaaatcccgtaagaaatgcgaaagttggaaggcacgcgctgattgtggattccaca
tcattaatcagattctacgatttgtttgattcgtctttattgagagatctcatcgtaacc
cagactgtatgggaaggagtcaaagcaaaagctgtaccagcctacaagaaaatgaattct
ttgtgttatgaagatgcgaaagacagatttcacgtgttcatgaacgaatttcactgcgag
accttctccgaatcatcgaaatttgaggatttgagtcgtggcgaagagcttctactttca
acagctctttacttgaaaactcattggcagaagcataacgtggctcctgttgtcttagtt
tttgatgaagattcgaaaaaaagaatggaaaatcactaccaacacgtgatgtatttaaag
gaatacatacaaaatttggaggatccaggaaaacaagcacttttggatcaaatggctgcg
tatgaaagctctggaaatggaaatgagaaacaaattttcgatgaatatctatcgcatgat
agaattatggagggaattgccagtggaacgatcaaaagaggaaatttcagtgtttcaaga
gaaaattatcgcgaagctactgttattattgatgatcagttaacatcttggttcatcaca
ggaaataattgcaatcgtgccgtcaatggagataccgtcgcagttcaacttttgccagaa
gaccaatggactgctccagagaagaaaattcgactccgtgacgttgaagaatatgttaaa
actgcagatgacatgggaaatgaagacgaggagaatgatgacgagaacgatgagccaaaa
gctaaaaagtcgaagaaaatgactgtttcaactgcaaaagttgttggaattatcaaaaga
aattggcgtgaatattgtggaatgttgctgccaagtacagtgaaaggagccagaagacac
ttgttctgtccagctgaacgacttattccaagaattcgaatcgagacggaacaggctgaa
actttatcacagcagagaattgtggtggctattgatcactggccaagagattccaagtat
ccacttggacattacgtcagatcaatcggagagatgggatcccgtgaaactgaaaatgag
gttctccttctcgaacatgatattccacatgctccattctcagaatctgttcttgattgt
ctaccacgtgaagaatgggaaccagatctcactgaaaaccgcggccctctaccacgtgtt
gatttgagagatttaacaatttgttcagttgatccacttggatgtacagatattgacgac
gcattacactgtaaacaaattggagaggatcttttcgaagttggagttcatattgcagat
gtcacgcattttgttagaccaggaaccgcaatcgacgatgaagcagcattacgtggaact
acagtatacctttgtgatcgtcgtatcgatatgcttccatgtctgctcagttccaatttg
tgctcacttcgcggagaagaagagcgttatgcattttcgtgtatttggacaatgacttct
agtgctgatatacaatcagttaaatatcacaaatctctaattaaatcaaaagctgcattg
acttatgagaaggcacaagagattattgacgatccaaaagagcagaatgacgtggcattg
ggattacgtggattgatgaaattgtcgaaagttttgaatgcgagaagaactggaaatgga
gcattgacgttggcatcgagtgaagttcgctttgatatggattgggagtccagaacacca
aagaaagtaatggaaaagcagcatttggacacacattcaatggttgaagaattcatgctt
ctcgcaaatatctccgttgccgagaaaattcttgaggaatatccagattgtgcactttta
agaaggcatcccgttccgttgaaggagagctataagccattggttgaggccgcccgtcat
cgtggatttgagattattgttgaaagtggaaaagggttggctgactcgttgaatcgatgt
gtcgataagaaaaatccaatgttaaataggctcctgagaatgctcacgactcgttgcatg
actcaagctgtctatttctctgctggaacagtcccagtgccacaatatcaacatttcggg
ctcgcatgtgccatttacacacatttcacatcaccaattcgtcgttatgctgacgtcatt
gttcaccgtcttttggcagcagccatcggagctgacgatattcaatcaggactcctgaat
caagcaagatgcacgaaaatctgtacaaacatcaattacagacacaaacaagctcaatac
gctggtcgcgcatcggttcaattgaacgttgttcgatatttcaagggaaaagtggaaacg
tgtgaaggatttgtgatgggtgtcaggaataatggaattcaggtgtttgttccaaaatat
ggtctcgaatcgattatcgtacttcaaacatctgcagcttctggtacaactatcgatgta
gaggaaatgtcggtcaaagtcaatggagatgttgttatcaaagaattggaaccggtaact
gtgcgaatcagtgtgaacgagaaaaaccaacaacgtccacgtgtcgaacttcagctaatt
aaaccagccattccaggactctctgttgattttgatctttcttcttctgaaggccttgga
ctttaa
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