Caenorhabditis elegans (nematode): CELE_Y66H1A.4
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Entry
CELE_Y66H1A.4 CDS
T00019
Symbol
garr-1
Name
(RefSeq) putative H/ACA ribonucleoprotein complex subunit 1-like protein
KO
K11128
H/ACA ribonucleoprotein complex subunit 1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CELE_Y66H1A.4 (garr-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_Y66H1A.4 (garr-1)
03032 DNA replication proteins [BR:
cel03032
]
CELE_Y66H1A.4 (garr-1)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
CELE_Y66H1A.4 (garr-1)
DNA replication proteins [BR:
cel03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
CELE_Y66H1A.4 (garr-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
176870
NCBI-ProteinID:
NP_499927
WormBase:
WBGene00022046
Ensembl:
WBGene00022046
UniProt:
Q9TYK1
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All DBs
Position
IV:426168..427204
Genome browser
AA seq
244 aa
AA seq
DB search
MSFRGGRGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGGRGGYDQGPPEEV
VLVGVFSHQCQDDIVCNNTSGKIPYFNAPIYFKNKEQVGKIDEIFGSPGENGFSVTLSQG
VKASSFEPESQLYIDPGKLLPVDRFLPQAGGGRGRGGRGRGGDRGGRGSDRGGRGGFGRG
GGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGRGGDFGGRGRGDFKRSYDGGSFGGQNNKR
TKFE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccgtggtggacgtggaggcggtggtggatttcgaggtggtcgtggtggcggt
ggaggcggtggattccgtggaggtcgcggcggtgacagaggtggtggcttccgtggagga
cgcggtggattcggagggggcggccgtggaggttacgatcagggaccaccagaggaagtt
gtgctcgtcggtgtcttctcccatcagtgccaagatgatattgtttgcaacaatacgagt
ggaaaaatcccatatttcaatgctccaatttacttcaagaataaggaacaagtcggaaaa
atcgacgagatttttggatcccccggggagaacggattctccgtcacattgtcacaagga
gtaaaagcctcttcattcgaaccagagtctcagctgtacattgatcccggaaagctttta
ccagttgatcgtttccttccacaagccggcggagggcgtggaagaggtggtcgcggacgc
ggtggggatcgtggaggacgtggcagtgaccgtggaggtcgtggaggctttggaagaggc
ggcggcggtggattcagaggcggggatcgcggaggttttggcggtggtcgtggaggattc
cgaggcggagaccgtggagggttccgtggtggccgtggaggagacttcggaggtcgcgga
cgtggagacttcaaacgatcatacgatggtggaagtttcggaggacagaataataagaga
actaaattcgaataa
DBGET
integrated database retrieval system
