Caenorhabditis elegans (nematode): CELE_F57B9.2
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Entry
CELE_F57B9.2 CDS
T00019
Symbol
let-711
Name
(RefSeq) CCR4-NOT transcription complex subunit let-711
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CELE_F57B9.2 (let-711)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_F57B9.2 (let-711)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CELE_F57B9.2 (let-711)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CELE_F57B9.2 (let-711)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
DUF1778
Motif
Other DBs
NCBI-GeneID:
175971
NCBI-ProteinID:
NP_498516
WormBase:
WBGene00002845
Ensembl:
WBGene00002845
UniProt:
Q20937
LinkDB
All DBs
Position
III:<6946718..>6958894
Genome browser
AA seq
2641 aa
AA seq
DB search
MHSTSGLAPVFRVEENHMIRNRENLERPISKKGTITLLSKMPMGFVLNSCSCAYIDNLLA
HSSIHRVKPHSFMIQRLVVICGRSSPSLPNHAANIILSAFNFCQIEAPAKKFLEEDAALS
LFHTILSYSTVTQINRSGIEILGAQRLTSALCDLIYAYTKTMDDMVASKTLTHLCKKLAG
LFDPLVVLPFISKLAKSRRLRHYLQPLFLGHCEYTSDTWGVSPEGAEIYNQIARGNFTTQ
TLIEIVQTFLEKEVKEVIISSTTDPIKLVQYLISCSNPDNTEIVQALAFLLYSNTKLLPA
GSGGTIDMDVQAADTITTARLGDTKFTQPVKDALLDSGREALLRRMEIYGVSLLSSVENF
VTELKQAPIQKKMVTNNSVANAILYMLQYNFDMSRDIENGRQDNSPFWGGSNFVIGITRF
VEEQQAAVRDMEGFSDWYPDINWVEVIKEFDSEEFAICRQTIIMFADIFPIMFQPQNFPV
SFFLTPWRYYDHQLRLFEFMIEYADVWNISQYPHTKVLTPDLNLKTIPDDSTSVVQLWNC
QEFSNCLLTIANSQPSLYNAIKQFYNVGSMQAGDVSMLALILSPTQWTTGRQDLIRHFLP
SFILKSPNVTPVLNLVWNDTSLSKHMRQHVIYCLTSMHAADSSQLAKILDVAHDIKPTGL
SELLNQAPKHLAFMVDLACLASKRDYLNLEKWIEDKEKAHGEAMTVAVLQFIQKKYQHAQ
LVAAIAPKTQATTPGAPSEPLQVLIPFVSKRARKPLRQQFPLVFQVMKENSGRSSSVSSG
GHVQQSSGSQPQQQQFGGGSGLPPSGVVPVQQQPQQPPSLQQQHSQQSLPTPPTTSQQQI
HVQQSVPGPIQRPAQFAPQPMFPPQAQAQHQHQHMMGQPPPSSQNAQPGMNLLMNMSPFA
SGNNRDLLKVVQPAPPPPSSMSPSTQMMRSLIPPLTQRQNSNSGWHAAPAPQRPSGPPTP
QQQMDFRGQIQEFAPQGPHQLQRSGSVTGRSMGIVGQKTSSNFSVGAPIPGSAAATAAAA
ANVQQPMNEDFQSMTFAEDIQEEANSYFEKIYSVNNAMSVENLIDLLKRFRVSNDRRERL
VLACVVKNLFEEYRFFHEYPERELRTTAAVYGGIIREDIISNVQFATAVRKVIESLSADP
NTMLWTFGIVALQHCRSKLCAYPKVCQMIVSSENFARFPQLLKDYVIAGVKGELPPEGGR
HTPVGSAQAGSASSTPTPAAAPTNWGAVARAASVDPKNSLPANRTGNVLSYTNVDTLVMA
TNKDGAEIAQPAEAIVDKISFLFNNLSQSNLIQKKDEVVEMISDHGDAFTLWLAQYIVMK
RVSIEQNFQPLYNQFVNAIENPYLDQCIKRETFRNIRILLRTDKRTTVASNYSDRQLLKN
LGSWLGAITIARNKPILLNDLDLKSLLLEAYYKGQAELLYVVPFISKILTACSKTSLFTP
TCAWIRSILKVLAELHNEPDLKINLKFEIEVLCKELNVDLNQLQMDGILKDTEKLVRVPQ
QLCDVKLLTRPEAASPVQSKIHMSGSAEQLSGMSPAIPDQVKPATPQPTEAELQSGTGGG
GSQGAEAQVVPNVTHFAYHDINVLTYDGLIPHVKIVSHLPLFQLHPHAKHLVRPAMIHAI
KELIGPVTERALKIAMTVTESLVRKDFALDPEEQNLRAASFHMMRAMTAGMAMITCRDPL
ASSMHSNLANAFSSSLRSTAANPEMKQMIEDAAATITQDNVELSTNFIVKTACEKATQDI
EKRLEADYQKRIAAKAEMSFYRDEIAAAIHAQLPKAIATVPGPTDKALMGIYDQFSSRIC
GFKANSGEDPVSAEPGSGAITPVQTQSKEMELVCQQLQVIIKEVDQTTQAQPHLSNSAFQ
TVCLMRELMQNVISTKDANHLMILVTRSTEHLLHAYRLEGTPPKNLLDVEWARRLRDLFI
GLMRLLQNYFPLVELSRRITTAIMQIRSDYKWNMEGIEILFKQNLLQSVLWDQHLAGSMD
NGGNMEAVLFAQKFVRSIGGGDMSRIQFLKERFPLTCEQLTKLHQLQSATRTEGMNNAMN
NGAGNAAHHHAGLQQQPPVALPMEAAPMPQASADAMAQRGYDDQEMTAKVEIIMREWIGL
CYSPTGQRSPQESLAQMIQLMHEHGVLATDDKITQFFRLCVENCVDISVRVMKSEQLANG
LPTTLIRHRCYYTLDAFVKLMALMIRHSDNGQSQNKINLLKKLLNIIVGVLHMDHEVRKQ
DFNAMPYHRILISLFNEITGPDPLKLLEPIAWSILEAFGQTFFALQPRRMPGFAFAWLDI
VGHRNVIGRLLANTGIAETVDAVKTAATYTQLIISHLKFLAPFLRNIQLPKSIAILYKGT
LRVLLVILHDFPELLCEFHYVICDTIPPNCVQLRNLILSAYPRQMRLPDPFALNFKQVDT
IPEMAVEPKSNLNMATIIPDNIRIPLDEYLANRISVDFLPNLPTLLQTQNQAGTKYNTTV
MNALVLYVGIRAIEHLHLRRQRISTLNIAHTSYMDIFQNLAIQLDTEGRYLLFNGIANQL
RYPNAHTHYFSCVFLYLFKNSTNDTIQEQITRILFERLVALRPHPWGLLITFIELIKNPT
YNFWRYEFTSCAPEIQRLFQNVANTCVPAQGSQPQAQPDGAPGPLGNNTGAANQQQNPNT
N
NT seq
7926 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaacttcagggttggcccccgtttttcgtgtggaggaaaatcatatgattcgg
aatcgagagaatttggagagacctatctccaaaaaaggcaccatcacgcttttgtcgaaa
atgccgatgggattcgtgttgaatagttgctcttgtgcttatatcgacaatcttcttgct
catagcagtattcatcgtgtgaaacctcactcgttcatgattcagcgtctcgtagtcatt
tgtggtcgttcatcaccatcattgccaaatcatgcagccaatatcattctctctgcattc
aatttctgtcaaatcgaagcaccggcgaaaaagtttcttgaagaagacgctgcccttagt
ctttttcacactatactctcctattcgacagttacacaaattaatcgaagcggaatagag
attcttggagctcaacgtctcacttcggctctctgtgatttgatttatgcatacacgaag
accatggatgatatggttgccagcaagacattgacccatttgtgcaagaaactagccggt
ttattcgatcctctggtggtccttccgtttatcagcaagctcgccaagagccggcgtctt
cgtcactatcttcagcctttgttccttggtcactgtgaatatacatctgatacgtggggc
gtctctccggaaggtgctgaaatatacaatcaaattgcacgtggcaacttcacaacacaa
actttgatagaaatagtacagacatttctggagaaagaagtgaaagaagttatcatcagt
tcgactaccgatccaatcaaacttgtacaatatctgatatcgtgttccaacccggacaac
actgaaattgttcaagcactggccttccttctctactcgaatactaaactattaccagct
ggaagtggtgggacaattgacatggatgttcaggcggctgatacgattacaactgcccgg
ctcggtgatacaaagttcactcaacctgtgaaggatgcattgcttgattctggaagagag
gctctgctcaggcgaatggagatttacggagtatcgctgttgtcttctgttgaaaatttt
gtcaccgaattgaaacaggcaccaattcagaaaaaaatggtgactaacaattcagttgca
aatgccattttatacatgcttcagtacaattttgacatgtctcgagatattgaaaatgga
agacaggataattcgccgttttggggtggtagcaattttgtaattggcatcacacgattc
gtagaggaacagcaagcggctgtgcgagatatggaaggattctcggattggtatcctgat
atcaattgggtcgaagttatcaaagagtttgattctgaagaatttgcaatctgtcgtcaa
accattatcatgtttgctgatatctttccgataatgtttcagccgcagaatttcccagtt
tcatttttcctcacaccatggagatattatgatcatcaacttcgcttattcgagtttatg
atcgagtatgccgatgtatggaatatttctcaatatccacacacaaaagtgctcactccg
gatctaaatttgaaaacaattcccgacgattctacatcagttgttcaattatggaattgt
caagaatttagtaattgtttactcactattgccaattcgcaaccctcgctgtacaatgct
attaaacaattttacaatgttggatccatgcaagctggtgatgtatccatgcttgctctg
attttatcaccaacacaatggactactggccgtcaagatttgatcagacattttctgcca
tcttttattctcaagagtccaaatgtgactccagttttaaatttggtgtggaatgatacc
agcctttcaaaacacatgcgccaacatgttatatattgtctcacttccatgcacgctgca
gatagctcacaacttgcgaaaattcttgatgtggctcacgacataaagccaactggacta
tccgagttgctcaaccaagcgccgaaacatcttgcgttcatggttgatctcgcatgtcta
gcttccaaacgagactacttgaacctggagaaatggattgaagataaagagaaagcccat
ggtgaagctatgactgtcgctgtcctgcagtttattcaaaagaaatatcaacatgctcaa
ttggtagccgctattgctccaaaaacacaagcaacgacgccaggtgcaccgtctgaaccg
ctccaagttcttataccgttcgtgagcaaacgagcgaggaaaccgttgcgacagcagttt
ccacttgtgttccaggtaatgaaagagaactcgggtagaagttcgtcagtatcttctggc
ggacacgtacaacagagtagtggttcacaaccacaacagcagcagtttggcggcggctcc
ggacttccaccatccggtgtcgttcctgttcagcaacaaccacaacaaccaccttctcta
cagcaacaacattcccaacaaagtcttcctactccaccaacaacgtcacaacagcagatt
catgtccaacagtctgttcctgggccaattcagcgaccggctcagtttgcaccacagcca
atgttcccaccgcaggctcaggcacaacatcagcatcagcacatgatgggtcaaccgcca
ccatcatcacaaaatgctcagcctggaatgaatctcttgatgaatatgagtccttttgca
tctggtaacaacagggatttgctcaaagttgttcaacctgcaccacctcctccatcatca
atgtctccgtcgacacaaatgatgagatctttgattccaccacttactcaacggcagaat
tcaaactctggctggcatgctgctccggcaccacaaagaccatccggaccaccaacgcca
caacagcaaatggattttcgcggtcagattcaagagtttgcaccgcagggacctcatcaa
ttgcaacgaagcggaagtgtcaccggcagatctatgggaattgttggacagaaaacttca
tcgaatttttcagtgggagcccctattcctggaagcgcagcagccaccgctgctgctgca
gcaaacgttcagcaaccaatgaatgaggacttccagtcaatgacatttgcggaagatatt
caagaagaagccaattcgtatttcgagaagatctacagtgtaaataatgcgatgtcagtg
gaaaatttgatcgacctgttgaagcgattccgagtatcaaatgatcgtcgagagcgtctc
gttcttgcatgcgttgttaagaatttattcgaggagtacaggtttttccatgagtatcct
gaaagggagctccgaacaacagctgctgtttatggaggaatcattcgcgaggatattatt
tctaatgttcaatttgccactgccgttcggaaggtcattgaaagtctaagcgccgacccg
aatactatgctctggacatttggaatcgtagctcttcaacactgtcgaagcaaactttgt
gcttatccaaaggtgtgccaaatgatcgtgagtagcgaaaactttgcacggttcccacag
ctattgaaggactatgtcatcgctggtgtcaaaggagaacttcctccagaaggtggccgt
cacactcctgttggatctgctcaagccggatctgcttcttcaacaccaacaccagcggct
gctccaaccaactggggagctgtcgcgcgtgcggcatcggttgatcccaaaaattccctt
cccgctaaccgaacaggcaatgtcctatcatatacaaatgttgatactttggtaatggca
acgaacaaagatggagcagagattgcacaaccagctgaagctatcgtcgataagatctct
tttctgttcaacaatttgtcgcagtcgaacttgattcagaagaaagacgaagttgtggaa
atgatttccgatcatggagatgccttcaccctgtggcttgcacagtatattgtgatgaag
cgagtgtcaattgaacaaaattttcaaccactgtataatcagtttgtcaatgccatcgaa
aatccctatctcgaccagtgcattaaacgtgaaactttccgaaatatccgaattctctta
cgaacagacaaaaggacgaccgttgcatcaaattacagtgatcgacaactgctgaagaat
cttggaagttggcttggagctatcacaattgcaagaaataaacctattctgctcaacgat
ctagatttgaagagcttgcttcttgaagcgtactacaagggacaagctgagctactatat
gtagttccattcatttccaaaattttgaccgcatgttcgaaaacttcattgttcacgcct
acatgtgcttggattcggagtattttaaaagtcctggctgagctgcacaatgaaccggat
ctgaaaatcaatttgaagtttgaaattgaagtgttgtgcaaagagttgaatgtggatctc
aatcagttgcaaatggatggaattctcaaggatacggagaagctagttcgagttccacaa
caattatgtgatgttaaacttcttactcgtcccgaagcagcaagcccagtacaatctaag
attcacatgtctggctcggctgaacaactctctggaatgtcaccagcgattccagatcag
gtgaagcccgccacaccacaaccaacagaagccgagcttcaaagtggcactggaggtggt
ggttcccaaggagccgaagctcaagttgttccaaatgttactcactttgcctaccatgat
atcaatgttctcacctatgacggtctcattccacatgtcaagattgtttcacatcttcct
ttgttccaattgcatccacatgctaaacatcttgtacgaccagccatgattcatgctatc
aaagagttaataggacccgtcacggagagagcgttgaaaattgcaatgactgtcacagaa
tcattggttcgaaaggatttcgctttggacccagaagaacaaaatttgagagctgcatca
ttccatatgatgcgtgcgatgaccgctggaatggctatgatcacctgccgtgatccactt
gcgagctcaatgcactcaaatttggccaacgccttctcttcttcacttcgctcgacagct
gctaatccagaaatgaaacaaatgattgaagatgctgcagctacaatcacacaggataac
gttgaattgtccactaatttcattgtgaagacggcttgtgagaaagcaactcaggatatc
gagaagcgcctcgaggctgattatcagaagagaatcgctgcaaaggccgaaatgtcattt
tatcgggatgaaatcgctgcagctattcatgcccaactcccaaaagccattgcgactgta
ccaggtccaacggacaaggctctgatgggtatttacgatcagttcagtagccgaatctgc
gggttcaaagcgaattctggtgaagatccagttagcgctgagccaggaagtggcgcaatc
actccagttcaaacacagagcaaggaaatggaacttgtgtgccaacaattgcaagttatc
atcaaagaagttgaccaaaccactcaagctcaacctcatctgagtaattctgcattccaa
acagtatgcttgatgcgggagttgatgcaaaatgttattagcaccaaggacgctaatcat
ctcatgattctcgtcactcgcagcacagagcatttactccatgcttatcgactcgaagga
acgccaccaaagaatttgcttgatgtcgaatgggctcgcagactccgtgatctgtttata
ggactaatgcgtcttcttcaaaactatttcccattggttgaattgtctcgacgtattaca
acagcgatcatgcaaatacgctcggattacaaatggaacatggagggaatcgagatactg
ttcaagcaaaaccttcttcaatctgtcctttgggatcaacatttagccggaagcatggat
aacggaggaaatatggaagctgttttatttgcacagaagtttgttcgaagcattgggggt
ggagatatgagtcgcattcaattcctgaaagaaaggttcccacttacttgtgagcaactc
acaaaacttcatcaattgcaatccgctactcgaacagaaggaatgaataatgcaatgaac
aatggagctggaaatgctgcccatcatcatgctggactacaacaacaacccccagttgct
cttccgatggaagctgcgccaatgccacaagcttccgctgatgcaatggctcaaagagga
tatgacgaccaagaaatgactgcgaaagttgagattattatgcgagaatggattggtctg
tgctattctccaactggacaaagaagtccacaggagtcattggctcaaatgattcaactg
atgcacgaacatggtgttcttgctactgacgacaagatcactcagttcttccgtctttgt
gtggaaaattgtgtcgatatctctgtcagagttatgaaatcggaacaacttgcaaatgga
ttgccaacaaccttgattcgtcaccgatgttactacactttggatgcgtttgtcaagttg
atggccttgatgatcagacattcggataacggacaatcgcagaataaaataaatttgctg
aaaaaacttctcaacatcatcgttggagtgcttcatatggatcacgaagttcgcaagcaa
gatttcaacgctatgccataccaccgtattctgatcagcctgttcaatgagattactgga
cctgatccattgaaacttcttgaaccaatagcttggagcattttggaggctttcggacaa
actttctttgctctccaaccacgacgaatgcctggattcgctttcgcttggctcgatatt
gtcggacatagaaacgtgattggacgtcttttggcaaacactggcattgctgaaaccgtc
gatgctgtgaaaacggcagccacttacactcaattgatcatttctcatttgaagttcttg
gctccattccttcgtaacattcaattgccaaaatcgattgccattctgtacaagggaaca
ctacgtgttctgctggtcatacttcacgatttcccggagcttctttgcgaattccactat
gtaatttgcgatacgattccaccaaattgtgtgcaacttcgcaatttgatattatcagcg
tatccacgtcaaatgcgccttccggacccatttgcattgaacttcaaacaagttgacaca
attccagagatggcagtggaaccgaagtccaatttaaacatggctacaatcataccagat
aacattcgaattccattggatgaatatcttgcaaatcgtatatctgtcgatttccttcca
aacctgccgactcttttgcaaactcagaatcaagccggtaccaaatacaacactactgta
atgaacgctctcgttttgtacgtcggaatcagagctattgagcacttgcacttgagacgt
caacgtatctcaacgctgaacatagctcatacatcgtatatggacattttccagaattta
gcaattcaattggataccgaaggacgttaccttcttttcaacggaatcgccaatcaactt
cgttatccaaatgctcatacacactacttcagctgtgtatttttgtatctcttcaagaac
tctacaaatgacacaattcaagagcagatcacacgtattctgttcgagcgtcttgtagct
ctccgacctcatccatggggacttcttataacgttcatagagctcatcaagaatccaaca
tacaacttctggcgttatgagttcaccagttgtgcaccagaaatacagagattgttccaa
aatgttgccaacacttgtgtcccagcccaaggatctcagccacaagcacaaccagatggt
gccccaggacctttaggaaacaataccggagctgctaatcaacagcaaaacccaaacacc
aactga
DBGET
integrated database retrieval system
