Caenorhabditis elegans (nematode): CELE_F18C5.2
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Entry
CELE_F18C5.2 CDS
T00019
Symbol
wrn-1
Name
(RefSeq) ATP-dependent helicase wrn-1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cel03032
]
CELE_F18C5.2 (wrn-1)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_F18C5.2 (wrn-1)
Enzymes [BR:
cel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CELE_F18C5.2 (wrn-1)
DNA replication proteins [BR:
cel03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CELE_F18C5.2 (wrn-1)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CELE_F18C5.2 (wrn-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RQC
HRDC
RecQ_Zn_bind
HTH_40
Sigma70_r4_2
ResIII
DUF4683
HTH_24
HTH_22
Motif
Other DBs
NCBI-GeneID:
174081
NCBI-ProteinID:
NP_495324
WormBase:
WBGene00006944
Ensembl:
WBGene00006944
UniProt:
Q19546
LinkDB
All DBs
Position
II:<6554977..6559263
Genome browser
AA seq
1056 aa
AA seq
DB search
MISDDDDLPSTRPGSVNEELPETEPEDNDELPETEPESDSDKPTVTSNKTENQVADEDYD
SFDDFVPSQTHTASKIPVKNKRAKKCTVESDSSSSDDSDQGDDCEFIPACDETQEVPKIK
RGYTLRTRASVKNKCDDSWDDGIDEEDVSKRSEDTLNDSFVDPEFMDSVLDNQLTIKGKK
QFLDDGEFFTDRNVPQIDEATKMKWASMTSPPQEALNALNEFFGHKGFREKQWDVVRNVL
GGKDQFVLMSTGYGKSVCYQLPSLLLNSMTVVVSPLISLMNDQVTTLVSKGIDAVKLDGH
STQIEWDQVANNMHRIRFIYMSPEMVTSQKGLELLTSCRKHISLLAIDEAHCVSQWGHDF
RNSYRHLAEIRNRSDLCNIPMIALTATATVRVRDDVIANLRLRKPLITTTSFDRKNLYIS
VHSSKDMAEDLGLFMKTDEVKGRHFGGPTIIYCQTKQMVDDVNCVLRRIGVRSAHYHAGL
TKNQREKAHTDFMRDKITTIVATVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGRAGRD
GSPSICRVFWAPKDLNTIKFKLRNSQQKEEVVENLTMMLRQLELVLTTVGCRRYQLLKHF
DPSYAKPPTMQADCCDRCTEMLNGNQDSSSSIVDVTTESKWLFQVINEMYNGKTGIGKPI
EFLRGSSKEDWRIKTTSQQKLFGIGKHIPDKWWKALAASLRIAGYLGEVRLMQMKFGSCI
TLSELGERWLLTGKEMKIDATPILLQGKKEKAAPSTVPGASRSQSTKSSTEIPTKILGAN
KIREYEPANENEQLMNLKKQEVTGLPEKIDQLRSRLDDIRVGIANMHEVAPFQIVSNTVL
DCFANLRPTSASNLEMIDGMSAQQKSRYGKRFVDCVVQFSKETGIATNVNANDMIPPELI
SKMQKVLSDAVRRVYTEHLISRSTAKEVATARGISEGTVYSYLAMAVEKGLPLHLDKLNV
SRKNIAMALNAVRVHLGSNVAVLTPWVEAMGVVPDFNQLKLIRAILIYEYGLDTSENQEK
PDIQSMPSTSNPSTIKTVPSTPSSSLRAPPLKKFKL
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgataagtgatgatgacgatctaccatctactcgcccgggatctgtgaatgaggaatta
ccagaaaccgaacccgaagataatgatgagttgcctgaaacagaacctgaaagcgattcc
gataaacctaccgtaacctcgaataaaacagaaaaccaagttgctgatgaagattatgat
tcattcgacgattttgtgcccagtcaaacacacacagcctccaaaatacctgtaaaaaat
aaacgagccaaaaagtgcactgtagaatctgattcatcatcttcggatgattccgatcaa
ggagatgattgtgaatttatcccagcttgtgatgagacacaggaagttccgaaaatcaaa
agaggatacactctgagaactcgagcaagtgtaaagaacaaatgtgatgattcatgggat
gatggaatagacgaagaagatgtctcaaaaagatcagaagacacgttaaatgattcattt
gttgatcctgaattcatggattctgttctagataatcaattaacgatcaaaggcaaaaag
caatttctcgatgatggagagtttttcacagaccggaatgttcctcagattgatgaagct
acaaaaatgaagtgggcatcaatgacgtcacctcctcaagaagctttgaacgcattgaac
gaattcttcggtcataaaggattccgagaaaagcagtgggatgttgtcagaaatgttttg
ggaggaaaagaccaatttgttcttatgtccactggttatggtaaaagtgtatgttatcag
ctaccatcacttcttctcaattcgatgactgtcgtggtatctccattaatttcattgatg
aatgatcaagtaactacattggtttctaaaggtattgatgcagtgaaactagatggacat
tctacacaaattgaatgggatcaagttgcgaataatatgcaccgaattaggttcatctac
atgtcacctgaaatggttacgagccaaaagggtttggaattattaacttcttgccgaaaa
catatctccctcctcgctattgatgaagctcattgtgtttctcaatggggacacgacttt
cgaaactcgtacaggcatctcgcagaaattagaaaccgatctgatctatgcaatattcca
atgattgctcttaccgctactgccacagttagagttcgtgatgacgtcattgctaattta
agactccgcaagccattaatcacaactacgtcgtttgatagaaagaatctctacatttct
gtgcattcttcaaaggacatggctgaagatttaggattattcatgaaaaccgatgaagtt
aaaggaagacactttggtggacctactattatttattgccaaacgaaacaaatggtcgat
gatgtgaactgtgttttgagaagaatcggagttcgttctgctcattatcacgcaggactc
actaaaaatcaacgagaaaaagcacacaccgattttatgagagataagattacaacaatc
gttgcgacagttgcatttggtatgggaattgacaaacccgacgttcgaaatgtgattcat
tacggatgcccgaacaatatcgaatcatattatcaagaaatcggaagagctggtcgagat
ggatctccaagtatttgtcgtgtattctgggctccgaaagatttgaatactataaaattt
aaacttcgaaattcgcagcaaaaagaagaagtagttgaaaatcttacaatgatgctaaga
caactcgagttggttctgacaaccgttggatgtagaagataccaacttctgaagcacttt
gacccatcatacgcgaaacctccaactatgcaagctgattgttgtgatagatgtactgaa
atgctcaatggaaatcaagattcatcatccagtattgttgatgttacaacagaatcgaag
tggttgtttcaagttattaacgaaatgtacaacgggaaaactggtatcggaaaaccaatc
gaatttctgaggggatcgagtaaagaagactggcgaatcaagaccacatctcaacaaaaa
ttgtttggaattggaaaacatattcctgataaatggtggaaagcacttgcagcatcactt
cgaattgctggttatcttggagaagttaggctgatgcaaatgaaatttggaagttgtatc
actttgtccgaactcggggaacgatggcttttgactggaaaagagatgaaaatcgatgcg
acaccgattttattgcaagggaagaaagaaaaagccgcaccttcaactgtccccggagct
tcaagatctcagtcaactaaatcaagtacagagattccaaccaagattctcggagcgaat
aagattcgtgaatacgagcctgcaaatgaaaacgagcagctgatgaacttgaaaaagcaa
gaagtcactggtcttccagagaagattgatcaactgcgctctcgtcttgacgacattcgt
gtaggaattgcaaacatgcatgaagtagcaccattccaaattgtatcgaatactgttctt
gattgttttgccaacttgagacctacctcagcctcgaatctcgaaatgattgatggaatg
tcggctcagcagaaatctagatacggaaaacgatttgtcgattgtgttgtacaattttca
aaggaaactggcattgcaacaaacgtcaatgccaacgatatgataccccctgaacttatt
tcaaaaatgcagaaagttctctcggatgcggtgagaagagtatacacagagcatcttatt
tcgagatccactgcgaaagaagtggcaactgctcgaggaattagtgagggtactgtatat
tcatatctcgcgatggcggtagaaaaaggattacctcttcacttagacaagttaaatgtc
tccagaaagaatattgcaatggctctaaatgcagttagagtacatttaggatcaaatgtt
gccgtactgacaccatgggttgaagctatgggagtcgtacctgattttaatcagttgaaa
ttgatccgggcaattcttatttacgaatatggattggatacgagtgagaaccaagagaag
ccagacatccaatctatgccgtccacttcaaatccatccaccatcaaaacagttccatca
acaccttcatcctctctcagagctcctccattgaagaaattcaaactttaa
DBGET
integrated database retrieval system