Caenorhabditis elegans (nematode): CELE_F54F2.1
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Entry
CELE_F54F2.1 CDS
T00019
Symbol
pat-2
Name
(RefSeq) Integrin alpha pat-2
Organism
cel
Caenorhabditis elegans (nematode)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
FG-GAP_2
DUF4381
Pox_EPC_I2-L1
Motif
Other DBs
NCBI-GeneID:
176240
NCBI-ProteinID:
NP_498948
WormBase:
WBGene00003929
Ensembl:
WBGene00003929
UniProt:
P34446
LinkDB
All DBs
Position
III:8818899..8825266
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AA seq
1226 aa
AA seq
DB search
MREGSFPRRIGLLLGLLGLLAGVATFNIDTKNVVVHHMAGNYFGYSLDFYHEQKGMPVLV
VGAPEAESNNPNLAGIRRPGAVYACSVNRATCREVHVDKMKGNLKKLNGSHLVPIEEKSH
QFFGATVRSNDKHDKIVVCAPKYTYFYSKFEVIEPVGTCFYAENGFDNAEEFSSCKQEPA
RHGRHRLGYGQCGFSAAVPGKKNQNRVFIGAPGVWYWQGAMFSQNIKNQTDRPNTEYGSK
EYDHDMMGYSTATGDFDGDGIDDIVAGVPRGNDLHGKLVLYTSKLKMMINLTDEVSTQHG
QYCGGSVAVADVNKDGRDDIIMGCPFYTDYGSVKDAKTQERKPQYDVGKVIVMLQTAPGV
FGKQIAVVGDDQWGRFGHAVAAAGDLNLDGYNDVIVGAPYAGKNKQGAVYVIHGSKDGVR
ELPTQKIEGANIGHGNIKSFGFSLTGNEDVDGNGMPDIAVGAWKSGNAAVLLTKPVVTVT
GQTEPESALISVEDKNCDVDGKLGKQACKHINTCFKYEGKGDTPNDLEFDLRFNLDDHSP
EPRAYFLQKDVKSDRSIKVAQGSKTRDHPSSIEQRVRLEKGRQKCFRHRFFASSTMKDKL
SPIHWSVNYTYVESKTGKLRGDKLEPAIDTTVPLSFQNKINIANNCGKDDLCVPDLKVTA
VADREKFLLGTQDNTMLINVTVQNGGEDSYETKLYFDVPQGFEYGGIESVGGDGSKSAPA
CSPTSDEPDSDGKWTFACDLGNPLPANKVVSSVVRVTASSDKPPLAPISINAHVNSSNDE
EAHTVADNKVTFTIPVDFKNQLSLNGRSNPEQVDFSMTNKTRVDAFDDNEIGPVVSHLYQ
ISNRGPSEVDSATLDIFWPSFSTEGGHLLYIITEPVVNPPNKGRCRVKQLQNVNPLNLRI
TNEHVPTEPPVAKTPNEYSREEDDESYEDETTTQSQSTRHQSTQHQTHHQSGPVHVYEKD
EEKIRQNTGNWQYVEDKKKKGDYEYIPDDQEYDGDDFEEEDDEDFDRAGSKRVKRNPTPK
KKKKGGEHRGEPRSDKARFSDLREAVKLSKEAGGVVDYKGPLSRASVDCNSLRCTHIECD
IYDLKEDEFVLVEIFSRLYTNTLVDEKNPGGDISSLALARVTSTKYNLPHKPTLITAVST
NMNAIASEEGRDLPWWLYLLAILIGLAILILLILLLWRCGFFKRNRPPTEHAELRADRQP
NAQYADSQSRYTSQDQYNQGRHGQML
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgcgagagggtagttttccgcgaaggatcggcttgcttctaggcttactgggcctttta
gccggagttgccaccttcaacatcgacacaaaaaatgtagtggttcatcacatggctggt
aactactttggatactcactcgatttttaccatgagcagaagggaatgcctgtcctcgtt
gtcggtgcccctgaagctgaaagcaataacccaaacctggctggaatccgaagacctgga
gcagtttatgcttgctccgtgaaccgggcaacatgccgagaagtccacgtggataaaatg
aagggaaacttgaagaaactcaatggatcacatcttgttccaattgaagaaaaatcacat
caattctttggtgcaactgttcgatcaaatgataagcatgataaaattgtggtgtgtgct
ccaaaatacacatatttctactcaaaattcgaagttattgagccagttggaacctgtttc
tatgctgaaaatggatttgataatgcggaggagttttcatcgtgcaaacaagaacctgct
cgccacggtcgtcatcgtcttggatacggtcagtgcggattctcggctgcagttccagga
aagaagaatcaaaatcgtgtttttattggagcccccggtgtgtggtattggcaaggagca
atgttctcacagaacatcaaaaatcagacagaccgcccgaataccgagtacggtagcaag
gaatacgatcacgatatgatgggatattctacagcaactggagattttgatggagatggt
attgatgatattgttgccggagttccacgtggaaacgatttgcacggaaaattggtgtta
tacacgtcgaaactgaagatgatgatcaatttgactgatgaggtgtcaactcaacatgga
caatattgtggaggatctgttgcagttgctgatgtaaataaagatggacgcgacgacatt
atcatgggctgcccattctacacagattacggtagcgtgaaagacgcaaaaacacaagaa
agaaaaccacaatacgatgtcggaaaggtcattgtgatgcttcaaactgctccaggagtc
tttggaaaacagattgcagttgttggagatgatcagtggggacgatttggacacgcagtc
gcagcagctggagacttgaatttggatggttataatgatgtaattgttggtgcaccatat
gctggaaaaaacaaacaaggagctgtttatgtgatccacggatccaaagatggtgttcgc
gaactaccaactcagaagatcgaaggagccaatattggtcatggaaatatcaaatcattt
ggcttctcccttactggaaacgaagatgttgatggaaatggaatgccagacattgcagtt
ggagcatggaaatctggaaatgcagctgttttactcacaaaaccagttgtcactgtcacg
ggacaaactgaaccagagagtgcattgatcagtgtagaagataagaattgcgatgttgat
ggaaaattgggaaaacaggcatgcaaacatattaatacatgtttcaaatatgaaggaaaa
ggagatacaccaaatgatttggaatttgatcttcgattcaatcttgatgatcattctcct
gaaccaagagcttatttcttgcaaaaagatgtgaaatctgacagaagcattaaagttgca
caaggatctaaaacaagagaccatccatcttcaatcgaacaacgtgttcgtcttgagaag
ggacgacaaaagtgtttcagacatcgattctttgcttcttccacaatgaaagacaagctc
tccccaattcattggtccgtcaactacacatatgttgaatcaaaaaccggaaaacttcgt
ggtgataagcttgaaccagcaattgacacaactgtaccactttcattccaaaataagatt
aatattgcaaataattgtggaaaagatgatctttgtgttcctgatttgaaggttaccgct
gttgctgatcgtgagaaattccttttgggaactcaagacaatacaatgcttatcaatgta
acagttcaaaatggaggagaagattcatatgagacaaaactttatttcgatgttccacaa
ggattcgaatacggtggaattgaaagtgttggtggagatggaagcaagtctgctccagct
tgttctccaacttccgatgaaccagattcggatggaaaatggacttttgcatgtgatctc
ggcaatccacttccagctaacaaagtagttagtagtgttgtaagagtgactgcttcttct
gataaacctccacttgctccaatcagtattaatgctcatgtgaacagtagtaatgatgaa
gaagctcatactgttgctgataataaagtcacattcactattccagttgattttaagaat
caattgagtttgaatggtagatcaaatcccgaacaagtcgatttctcaatgacgaacaaa
acacgtgtagatgctttcgatgacaatgaaattggtccagttgtttcacatctttatcaa
atcagtaatcgtggtccatctgaggttgactcagctactttggatatcttctggccatca
ttttccactgaaggaggtcatcttctgtacattatcacagaaccagttgttaatccacca
aataaaggaagatgtcgggtcaaacaactgcaaaatgttaatccattgaatttgaggata
acaaatgagcatgttccaactgaaccaccagttgccaagacaccaaatgaatattcaaga
gaagaagatgatgaatcatatgaagatgaaacaacaactcaatcccaatcaacacgtcat
caatctacacaacatcaaactcatcatcaatctggtccagtacatgtatacgaaaaagac
gaggagaagattcgtcagaatactggaaattggcaatatgttgaggataaaaagaagaag
ggagattatgaatatattccagacgatcaggaatatgatggagatgattttgaagaggaa
gatgatgaagattttgatagagctggaagtaagagagttaaaagaaatccaacaccaaag
aagaagaagaagggaggagaacaccgtggtgaaccaagaagtgataaggctagattctct
gatcttcgtgaagctgttaaactttcgaaggaagctggaggagttgttgattataaggga
ccactatcaagagcatctgttgattgtaattcattgagatgtacacatattgaatgtgat
atttatgatcttaaagaagacgagtttgtacttgtggaaatcttctctagattatacaca
aacacattggttgatgagaaaaatcctggaggagacatttcatcgttggctcttgctcgt
gtcacatctactaaatacaatcttccacataagccaacattgataacagcagtatctaca
aatatgaatgcaattgcttctgaagaaggaagagatcttccttggtggctttatcttttg
gctattcttattggacttgccattttgattcttcttattttactgctctggaggtgtggt
ttcttcaaacgtaatcgtccaccaactgagcatgcagaactccgtgccgaccgtcaacca
aatgctcaatacgctgatagtcaatcccgttatacatcacaagatcagtacaatcaggga
cgtcacggacaaatgctataa
DBGET
integrated database retrieval system