KEGG   Caenorhabditis elegans (nematode): CELE_F54F2.1
Entry
CELE_F54F2.1      CDS       T00019                                 
Symbol
pat-2
Name
(RefSeq) Integrin alpha pat-2
Organism
cel  Caenorhabditis elegans (nematode)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha FG-GAP_2 DUF4381 Pox_EPC_I2-L1
Other DBs
NCBI-GeneID: 176240
NCBI-ProteinID: NP_498948
WormBase: WBGene00003929
Ensembl: WBGene00003929
UniProt: P34446
LinkDB
Position
III:8818899..8825266
AA seq 1226 aa
MREGSFPRRIGLLLGLLGLLAGVATFNIDTKNVVVHHMAGNYFGYSLDFYHEQKGMPVLV
VGAPEAESNNPNLAGIRRPGAVYACSVNRATCREVHVDKMKGNLKKLNGSHLVPIEEKSH
QFFGATVRSNDKHDKIVVCAPKYTYFYSKFEVIEPVGTCFYAENGFDNAEEFSSCKQEPA
RHGRHRLGYGQCGFSAAVPGKKNQNRVFIGAPGVWYWQGAMFSQNIKNQTDRPNTEYGSK
EYDHDMMGYSTATGDFDGDGIDDIVAGVPRGNDLHGKLVLYTSKLKMMINLTDEVSTQHG
QYCGGSVAVADVNKDGRDDIIMGCPFYTDYGSVKDAKTQERKPQYDVGKVIVMLQTAPGV
FGKQIAVVGDDQWGRFGHAVAAAGDLNLDGYNDVIVGAPYAGKNKQGAVYVIHGSKDGVR
ELPTQKIEGANIGHGNIKSFGFSLTGNEDVDGNGMPDIAVGAWKSGNAAVLLTKPVVTVT
GQTEPESALISVEDKNCDVDGKLGKQACKHINTCFKYEGKGDTPNDLEFDLRFNLDDHSP
EPRAYFLQKDVKSDRSIKVAQGSKTRDHPSSIEQRVRLEKGRQKCFRHRFFASSTMKDKL
SPIHWSVNYTYVESKTGKLRGDKLEPAIDTTVPLSFQNKINIANNCGKDDLCVPDLKVTA
VADREKFLLGTQDNTMLINVTVQNGGEDSYETKLYFDVPQGFEYGGIESVGGDGSKSAPA
CSPTSDEPDSDGKWTFACDLGNPLPANKVVSSVVRVTASSDKPPLAPISINAHVNSSNDE
EAHTVADNKVTFTIPVDFKNQLSLNGRSNPEQVDFSMTNKTRVDAFDDNEIGPVVSHLYQ
ISNRGPSEVDSATLDIFWPSFSTEGGHLLYIITEPVVNPPNKGRCRVKQLQNVNPLNLRI
TNEHVPTEPPVAKTPNEYSREEDDESYEDETTTQSQSTRHQSTQHQTHHQSGPVHVYEKD
EEKIRQNTGNWQYVEDKKKKGDYEYIPDDQEYDGDDFEEEDDEDFDRAGSKRVKRNPTPK
KKKKGGEHRGEPRSDKARFSDLREAVKLSKEAGGVVDYKGPLSRASVDCNSLRCTHIECD
IYDLKEDEFVLVEIFSRLYTNTLVDEKNPGGDISSLALARVTSTKYNLPHKPTLITAVST
NMNAIASEEGRDLPWWLYLLAILIGLAILILLILLLWRCGFFKRNRPPTEHAELRADRQP
NAQYADSQSRYTSQDQYNQGRHGQML
NT seq 3681 nt   +upstreamnt  +downstreamnt
atgcgagagggtagttttccgcgaaggatcggcttgcttctaggcttactgggcctttta
gccggagttgccaccttcaacatcgacacaaaaaatgtagtggttcatcacatggctggt
aactactttggatactcactcgatttttaccatgagcagaagggaatgcctgtcctcgtt
gtcggtgcccctgaagctgaaagcaataacccaaacctggctggaatccgaagacctgga
gcagtttatgcttgctccgtgaaccgggcaacatgccgagaagtccacgtggataaaatg
aagggaaacttgaagaaactcaatggatcacatcttgttccaattgaagaaaaatcacat
caattctttggtgcaactgttcgatcaaatgataagcatgataaaattgtggtgtgtgct
ccaaaatacacatatttctactcaaaattcgaagttattgagccagttggaacctgtttc
tatgctgaaaatggatttgataatgcggaggagttttcatcgtgcaaacaagaacctgct
cgccacggtcgtcatcgtcttggatacggtcagtgcggattctcggctgcagttccagga
aagaagaatcaaaatcgtgtttttattggagcccccggtgtgtggtattggcaaggagca
atgttctcacagaacatcaaaaatcagacagaccgcccgaataccgagtacggtagcaag
gaatacgatcacgatatgatgggatattctacagcaactggagattttgatggagatggt
attgatgatattgttgccggagttccacgtggaaacgatttgcacggaaaattggtgtta
tacacgtcgaaactgaagatgatgatcaatttgactgatgaggtgtcaactcaacatgga
caatattgtggaggatctgttgcagttgctgatgtaaataaagatggacgcgacgacatt
atcatgggctgcccattctacacagattacggtagcgtgaaagacgcaaaaacacaagaa
agaaaaccacaatacgatgtcggaaaggtcattgtgatgcttcaaactgctccaggagtc
tttggaaaacagattgcagttgttggagatgatcagtggggacgatttggacacgcagtc
gcagcagctggagacttgaatttggatggttataatgatgtaattgttggtgcaccatat
gctggaaaaaacaaacaaggagctgtttatgtgatccacggatccaaagatggtgttcgc
gaactaccaactcagaagatcgaaggagccaatattggtcatggaaatatcaaatcattt
ggcttctcccttactggaaacgaagatgttgatggaaatggaatgccagacattgcagtt
ggagcatggaaatctggaaatgcagctgttttactcacaaaaccagttgtcactgtcacg
ggacaaactgaaccagagagtgcattgatcagtgtagaagataagaattgcgatgttgat
ggaaaattgggaaaacaggcatgcaaacatattaatacatgtttcaaatatgaaggaaaa
ggagatacaccaaatgatttggaatttgatcttcgattcaatcttgatgatcattctcct
gaaccaagagcttatttcttgcaaaaagatgtgaaatctgacagaagcattaaagttgca
caaggatctaaaacaagagaccatccatcttcaatcgaacaacgtgttcgtcttgagaag
ggacgacaaaagtgtttcagacatcgattctttgcttcttccacaatgaaagacaagctc
tccccaattcattggtccgtcaactacacatatgttgaatcaaaaaccggaaaacttcgt
ggtgataagcttgaaccagcaattgacacaactgtaccactttcattccaaaataagatt
aatattgcaaataattgtggaaaagatgatctttgtgttcctgatttgaaggttaccgct
gttgctgatcgtgagaaattccttttgggaactcaagacaatacaatgcttatcaatgta
acagttcaaaatggaggagaagattcatatgagacaaaactttatttcgatgttccacaa
ggattcgaatacggtggaattgaaagtgttggtggagatggaagcaagtctgctccagct
tgttctccaacttccgatgaaccagattcggatggaaaatggacttttgcatgtgatctc
ggcaatccacttccagctaacaaagtagttagtagtgttgtaagagtgactgcttcttct
gataaacctccacttgctccaatcagtattaatgctcatgtgaacagtagtaatgatgaa
gaagctcatactgttgctgataataaagtcacattcactattccagttgattttaagaat
caattgagtttgaatggtagatcaaatcccgaacaagtcgatttctcaatgacgaacaaa
acacgtgtagatgctttcgatgacaatgaaattggtccagttgtttcacatctttatcaa
atcagtaatcgtggtccatctgaggttgactcagctactttggatatcttctggccatca
ttttccactgaaggaggtcatcttctgtacattatcacagaaccagttgttaatccacca
aataaaggaagatgtcgggtcaaacaactgcaaaatgttaatccattgaatttgaggata
acaaatgagcatgttccaactgaaccaccagttgccaagacaccaaatgaatattcaaga
gaagaagatgatgaatcatatgaagatgaaacaacaactcaatcccaatcaacacgtcat
caatctacacaacatcaaactcatcatcaatctggtccagtacatgtatacgaaaaagac
gaggagaagattcgtcagaatactggaaattggcaatatgttgaggataaaaagaagaag
ggagattatgaatatattccagacgatcaggaatatgatggagatgattttgaagaggaa
gatgatgaagattttgatagagctggaagtaagagagttaaaagaaatccaacaccaaag
aagaagaagaagggaggagaacaccgtggtgaaccaagaagtgataaggctagattctct
gatcttcgtgaagctgttaaactttcgaaggaagctggaggagttgttgattataaggga
ccactatcaagagcatctgttgattgtaattcattgagatgtacacatattgaatgtgat
atttatgatcttaaagaagacgagtttgtacttgtggaaatcttctctagattatacaca
aacacattggttgatgagaaaaatcctggaggagacatttcatcgttggctcttgctcgt
gtcacatctactaaatacaatcttccacataagccaacattgataacagcagtatctaca
aatatgaatgcaattgcttctgaagaaggaagagatcttccttggtggctttatcttttg
gctattcttattggacttgccattttgattcttcttattttactgctctggaggtgtggt
ttcttcaaacgtaatcgtccaccaactgagcatgcagaactccgtgccgaccgtcaacca
aatgctcaatacgctgatagtcaatcccgttatacatcacaagatcagtacaatcaggga
cgtcacggacaaatgctataa

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