Dictyostelium discoideum (cellular slime mold): DDB_G0279113
Help
Entry
DDB_G0279113 CDS
T00245
Symbol
metS
Name
(RefSeq) methionine-tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi00450
Selenocompound metabolism
ddi00970
Aminoacyl-tRNA biosynthesis
ddi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
DDB_G0279113 (metS)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DDB_G0279113 (metS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ddi01007
]
DDB_G0279113 (metS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddi03016
]
DDB_G0279113 (metS)
Enzymes [BR:
ddi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
DDB_G0279113 (metS)
Amino acid related enzymes [BR:
ddi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
DDB_G0279113 (metS)
Transfer RNA biogenesis [BR:
ddi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DDB_G0279113 (metS)
Prokaryotic type
Other AARSs
DDB_G0279113 (metS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA_bind
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
DZR_2
DUF2316
NHS
Motif
Other DBs
NCBI-GeneID:
8621878
NCBI-ProteinID:
XP_641872
dictyBase:
DDB_G0279113
UniProt:
Q54X95
LinkDB
All DBs
Position
3:complement(1648404..1650743)
Genome browser
AA seq
736 aa
AA seq
DB search
MSKPSNTPPLPKDGERNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLKNYNCIYI
CGTDEYGTATETKALSEGCTPKEICDKYHEIHKEIYEWFNISFDKFGRTSTNSQTEIAQD
IFNKIKDNGYTLTQEIEQLYCEQTCKMFLADRFVEGTCPHCKFEDARGDQCDGCSKLLNP
TELINPRCKVCSKPPVIKSTKHIFIDLPQLQQQVDQFVETNSKGGNWSENSIAITNTWVK
GELKPRCITRDLKWGTPVPMEEFKDKVFYVWFDAPIGYISITAEYTNEWEKWWKNPENVK
LVQFMGKDNVPFHTVIFPASLIGSKDNYTLLNNLSTTEFLNYETGKFSKSRNTGVFGDGA
KATGIPSEVWRFYLLNNRPESSDSIFSWDDFNFKNNELLNNFGNLVNRVLKMLNTNAAFN
GVVPKIGELNEVDKKLVQEVDEHLVQYFQKLEEISLKEGLKIAMSISKLGNTYMQDNKPW
DLSGKDNERCGQVLAILINLIKLLSTLLEPYIPSLTDKVHQQLNVEPTKYSTHFDINAIP
AGHEISKEILPLVKKIEADDLKKWRTKFSGIGPEFPIDMKIATVLEVNDHPSAENLYVIK
LSLGGDQTKTAVSGIKANFEKSQLIGKKLAVVLNLKPSKFKGVLSEAMILVADDGQATKE
SLSFLVPSNPQSIEAGSKIAGKGMSIKPKPTIDYQKEFLHYDLTCIDKIISYNKSQLFIN
QNEPLVSEKIGNGKVR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccatcaaacacaccacctcttccaaaagatggggagagaaatattttaatc
acatcagctttaccatacgtaaataatgttccacatcttggtaatattattggttgtgta
ttaagtgcagatgtatatgcaagatattgtcgtttaaaaaattataattgtatttatatt
tgtggtacagatgaatatggtacagcaacagaaacaaaagcattatcagaaggatgtaca
ccaaaagagatttgtgataaatatcatgaaattcataaagagatttatgaatggtttaat
atttcatttgataaatttggaagaacctcaaccaatagtcaaactgagattgctcaagat
attttcaacaagattaaagataacggatatacattaactcaagagattgaacaactttat
tgtgaacaaacttgtaagatgtttttagcagatcgttttgtggagggaacatgtccacat
tgtaaatttgaggatgcaagaggtgatcaatgtgatggttgttccaaattattgaatcca
accgaattgatcaacccacgttgcaaagtttgttcaaaaccaccagttataaaatcaacc
aaacacattttcatcgacttaccacaattgcaacaacaagtggaccaatttgtagagaca
aattccaagggcggcaattggagtgagaattccattgccatcaccaatacatgggtaaag
ggtgaattgaaaccacgttgtatcactcgtgatcttaaatggggcacaccagtcccaatg
gaggaattcaaggataaagtattctacgtttggttcgacgcaccaattggttacatttca
atcacagctgaatacaccaatgaatgggagaagtggtggaaaaatccagaaaatgtaaag
ttggtacaattcatgggtaaagataatgtaccattccatacagtgattttcccagcctct
ttaattggttcaaaagataattacacactcttaaataacctttcaaccacagagttcctc
aattatgaaactggtaaattctcaaaatcaagaaacaccggtgtatttggtgatggtgca
aaggcaacaggtatcccaagtgaggtatggagattctatctcttgaataatcgtccagaa
tcatcagattcaattttcagttgggacgatttcaactttaagaataacgaactcttgaat
aattttggtaatttagttaatcgtgtattgaaaatgttgaataccaatgcagcattcaat
ggtgtcgtaccaaagattggcgaattgaatgaggttgataagaaattggttcaagaagtc
gatgaacatttagtacaatatttccaaaaattagaggagatctcattgaaggagggttta
aagattgccatgtcaatctctaaacttggtaatacctatatgcaagataataaaccatgg
gatttaagtggtaaagataatgaacgttgtggtcaagtcttggcaatcctcatcaattta
atcaaacttttatcaaccctcttagaaccatacatcccatcactcaccgataaagtccat
caacaattaaatgttgaaccaactaaatattccacccatttcgacatcaatgcaattcca
gcaggtcatgaaatttcaaaggaaatcttaccattggtaaagaaaatcgaagccgatgac
ctcaagaaatggcgtacaaaattctctggaatcggaccagaattcccaatcgatatgaaa
attgccacagtcttggaggtaaatgatcatccatccgcagagaatttatatgtaattaaa
ttaagtttaggtggtgatcaaactaaaaccgcagtttcaggtattaaagcaaactttgaa
aaatcccaactcattggtaagaaattggctgtagtattaaatttgaaaccttcaaaattc
aaaggtgttctctctgaagcaatgattcttgttgctgatgatggtcaagccactaaagaa
agtttatcattcttggtaccatcaaatccacaatcaattgaagctggttcaaaaattgcc
ggtaaaggtatgtcaattaaaccaaaaccaacaattgattatcaaaaagaattccttcat
tatgatctcacttgtattgataaaattattagttataataaatctcaattatttatcaat
caaaatgaacctttagtttctgaaaaaattggtaatggtaaagttagataa
DBGET
integrated database retrieval system
