Escherichia coli K-12 MG1655: b3961
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Entry
b3961 CDS
T00007
Symbol
oxyR
Name
(RefSeq) DNA-binding transcriptional dual regulator OxyR
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
eco
Escherichia coli K-12 MG1655
Pathway
eco02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02026 Biofilm formation - Escherichia coli
b3961 (oxyR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eco03000
]
b3961 (oxyR)
Transcription factors [BR:
eco03000
]
Prokaryotic type
Helix-turn-helix
LysR family
b3961 (oxyR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-GeneID:
948462
NCBI-ProteinID:
NP_418396
Pasteur:
oxyR
RegulonDB:
ECK120000674
ECOCYC:
EG10681
ASAP:
ABE-0012973
UniProt:
P0ACQ4
Structure
PDB
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All DBs
Position
4158490..4159407
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AA seq
305 aa
AA seq
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MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQA
GMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKL
EMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREC
VPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTHFRATSLETLRNMVAAGSGITLL
PALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDGHFDKV
LKQAV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcgtgatcttgagtacctggtggcattggctgaacaccgccattttcggcgt
gcggcagattcctgccacgttagccagccgacgcttagcgggcaaattcgtaagctggaa
gatgagctgggcgtgatgttgctggagcggaccagccgtaaagtgttgttcacccaggcg
ggaatgctgctggtggatcaggcgcgtaccgtgctgcgtgaggtgaaagtccttaaagag
atggcaagccagcagggcgagacgatgtccggaccgctgcacattggtttgattcccaca
gttggaccgtacctgctaccgcatattatccctatgctgcaccagacctttccaaagctg
gaaatgtatctgcatgaagcacagacccaccagttactggcgcaactggacagcggcaaa
ctcgattgcgtgatcctcgcgctggtgaaagagagcgaagcattcattgaagtgccgttg
tttgatgagccaatgttgctggctatctatgaagatcacccgtgggcgaaccgcgaatgc
gtaccgatggccgatctggcaggggaaaaactgctgatgctggaagatggtcactgtttg
cgcgatcaggcaatgggtttctgttttgaagccggggcggatgaagatacacacttccgc
gcgaccagcctggaaactctgcgcaacatggtggcggcaggtagcgggatcactttactg
ccagcgctggctgtgccgccggagcgcaaacgcgatggggttgtttatctgccgtgcatt
aagccggaaccacgccgcactattggcctggtttatcgtcctggctcaccgctgcgcagc
cgctatgagcagctggcagaggccatccgcgcaagaatggatggccatttcgataaagtt
ttaaaacaggcggtttaa
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