Escherichia coli K-12 MG1655: b4022
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Entry
b4022 CDS
T00007
Symbol
rluF
Name
(RefSeq) 23S rRNA pseudouridine(2604) and tRNA(Tyr) pseudouridine(35) synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eco03009
]
b4022 (rluF)
Enzymes [BR:
eco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
b4022 (rluF)
Ribosome biogenesis [BR:
eco03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
b4022 (rluF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-GeneID:
948519
NCBI-ProteinID:
NP_418446
Pasteur:
yjbC
RegulonDB:
ECK120001849
ECOCYC:
EG11921
ASAP:
ABE-0013150
UniProt:
P32684
Structure
PDB
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All DBs
Position
4230354..4231226
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AA seq
290 aa
AA seq
DB search
MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGDQVKPGDVVKVNGQLIE
PREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFPIGRLDKDSQGLIFLTNHG
DLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKKEAPFVFRIT
LVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPLGEWRDLTDDELIDLFKLIENSS
SEVKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgactcatcagtccgtttaaataaatacatcagcgaaagcggaatttgctca
cgccgcgaagcggatcgctatatcgagcaaggcaatgtgttccttaatggcaagcgagcc
accattggcgatcaggtgaaacccggcgacgttgtgaaagtaaacggtcagttgattgaa
cctcgggaagccgaagatttggtacttatcgccctgaacaagcccgttggtattgtaagc
accaccgaagatggcgagcgcgataacattgtcgatttcgttaaccacagcaaacgcgtg
ttcccgattggccgcctggataaagactcccaggggctgattttcctcaccaatcacggc
gatctggtgaataagatcctgcgtgctggcaatgatcatgagaaagagtatctggtgacg
gtcgataaaccgattaccgaggagtttattcgcggcatgagtgcgggggtgccaatcctc
gggacagtgaccaaaaagtgcaaagttaaaaaagaagcgccgtttgtcttccgcattacc
ctggtgcaggggctgaaccgtcagatccggcgcatgtgcgagcatttcggctatgaagtg
aaaaagctggaacgcacgcgcatcatgaacgttagcttaagcggcattccgctgggggaa
tggcgcgatttaaccgacgatgagttaatcgacctctttaagctcattgaaaattcctct
tccgaggtaaaacctaaagcgaaggccaaaccgaaaacagcgggcatcaaacgtccagtc
gttaagatggaaaaaacggcggaaaaaggcggtcgcccggcgtccaacggtaagcgtttt
acctcgccggggcgtaaaaagaaggggcgctga
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