KEGG   Escherichia coli K-12 MG1655: b3822
Entry
b3822             CDS       T00007                                 
Symbol
recQ
Name
(RefSeq) ATP-dependent DNA helicase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
eco  Escherichia coli K-12 MG1655
Pathway
eco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    b3822 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eco03019]
    b3822 (recQ)
   03400 DNA repair and recombination proteins [BR:eco03400]
    b3822 (recQ)
Enzymes [BR:eco01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     b3822 (recQ)
Messenger RNA biogenesis [BR:eco03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     b3822 (recQ)
DNA repair and recombination proteins [BR:eco03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      b3822 (recQ)
SSDB
Motif
Pfam: RQC DEAD Helicase_C HRDC RecQ_Zn_bind ResIII Helicase_Sgs1 zf-CXXC
Other DBs
NCBI-GeneID: 948318
NCBI-ProteinID: YP_026263
RegulonDB: ECK120000824
ECOCYC: EG10833
ASAP: ABE-0012483
UniProt: P15043
Structure
LinkDB
Position
4005864..4007693
AA seq 609 aa
MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIP
ALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLY
IAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMAL
TATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIAL
STIGRVNQRFGMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLG
LVTQNIAQHSALQLTEAARPVLRGESSLQLAVPRIVALKPKAMQKSFGGNYDRKLFAKLR
KLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKPFMALIR
AHVDGDDEE
NT seq 1830 nt   +upstreamnt  +downstreamnt
gtggcgcaggcggaagtgttgaatctggagtccggagctaaacaggttttacaagaaacc
tttggctaccaacagtttcgccccggccaggaagaaattatcgacactgtgctttccggc
cgcgattgcctcgtcgtcatgcccactggtggcggaaaatccctttgctatcaaatccct
gccttattgctaaacggccttaccgtggttgtttcaccgctgatttcgttgatgaaagat
caggtggatcaactgcaagccaacggcgtggcggcggcgtgccttaactcgacgcaaacc
cgcgaacagcaacttgaagtgatgacaggctgccgcaccgggcaaattcgtctgctttat
atcgccccggaacgcctgatgctggataactttcttgagcatctggcgcactggaatccg
gtgttattagccgttgatgaagcgcactgtatctcccaatggggccacgatttccgcccg
gaatatgccgcgctcggtcagttgcgccagcggttcccgacgctgccgtttatggcgctg
accgccacagccgacgacaccacgcgccaggatatcgtgcgcctgctggggctgaacgat
ccgctgattcaaatcagcagttttgaccgtccgaatattcgctacatgctgatggagaag
ttcaaaccgctcgatcagttgatgcgctacgtgcaggaacagcgcggtaagtcaggcatt
atctactgcaacagccgcgcgaaagtagaagacaccgctgcgcgcctgcaaagcaaggga
attagcgcggcggcctatcatgccgggctggaaaataatgttcgcgccgatgtgcaggaa
aaattccagcgcgatgacctgcaaattgtggtggcgacggtggcgttcggcatgggcatc
aataaaccaaacgttcgcttcgtggtccactttgatattccgcgcaatatcgaatcctat
tatcaggaaaccggacgcgccgggcgtgatggcctgcccgcggaagcgatgctgttttac
gatccggctgatatggcgtggctgcgccgttgtctggaagagaagccgcaggggcagttg
caggatatcgagcgccacaaactcaatgcgatgggcgcgtttgccgaagcgcaaacttgc
cgtcgtctggtattgctgaactattttggcgaagggcgtcaggagccgtgcgggaactgc
gatatctgcctcgatccgccgaaacagtacgacggttcaaccgatgctcagattgccctt
tccaccattggtcgtgtgaatcagcggtttgggatgggttatgtggtggaagtgattcgt
ggtgctaataaccagcgtatccgcgactatggtcatgacaaactgaaagtctatggcatg
ggccgtgataaaagccatgaacattgggtgagcgtgatccgccagctgattcacctcggc
ctggtgacgcaaaatattgcccagcattctgccctacaactgacagaggccgcgcgcccg
gtgctgcgcggcgaatcctctttgcaacttgccgtgccgcgtatcgtggcgctcaaaccg
aaagcgatgcagaaatcgttcggcggcaactatgatcgcaaactgttcgccaaattacgc
aaactgcgtaaatcgatagccgatgaaagtaatgtcccgccgtacgtggtgtttaacgac
gcaaccttgattgagatggctgaacagatgccgatcaccgccagcgaaatgctcagcgtt
aacggcgttgggatgcgcaagctggaacgctttggcaaaccgtttatggcgctgattcgt
gcgcatgttgatggcgatgacgaagagtag

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