Escherichia coli K-12 MG1655: b3166
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Entry
b3166 CDS
T00007
Symbol
truB
Name
(RefSeq) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eco03016
]
b3166 (truB)
Enzymes [BR:
eco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
b3166 (truB)
Transfer RNA biogenesis [BR:
eco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
b3166 (truB)
Prokaryotic type
b3166 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
947687
NCBI-ProteinID:
NP_417635
Pasteur:
truB
RegulonDB:
ECK120001159
ECOCYC:
EG11177
ASAP:
ABE-0010404
UniProt:
P60340
Structure
PDB
LinkDB
All DBs
Position
complement(3311833..3312777)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaacct
cagggtatgtccagcaacgatgcgctgcaaaaagtgaaacgtatatataacgccaaccgt
gccgggcataccggtgcgctggacccgctggcgaccggcatgttgccgatttgcctcggg
gaagcgacgaagttttcccagtatctgctggactccgacaaacgctatcgggtcattgcg
cgtcttggacagcgtaccgatacttctgatgccgacggacagatcgttgaagaacgtccg
gtaacctttagcgcagagcagctggcagcggcactggatactttccgtggcgatatcgaa
cagatcccttcgatgtattcagcactgaaatatcagggcaaaaaactgtacgaatatgcg
cgtcagggcattgaagttccgcgtgaagcgcgtccgattaccgtttatgaattgctgttt
attcgccatgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcaccatcattgatgacctgggtgaaaaactcggctgtggcgcgcatgttatttacctg
cgccgtctggcggtaagtaaatatccggttgaacggatggtgaccctggagcacctgcgt
gaacttgttgagcaagctgaacagcaggatattccagccgcggagttacttgatccatta
ctgatgccaatggacagtccagcttcggactatccggtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccggttcgtacatctggtgcgccactggaaggactg
gttcgcgtcacggaaggtgagaacggcaaatttatcggtatgggcgaaattgacgatgaa
ggccgcgttgcgcctcgtcgcctggtggttgaatacccggcgtaa
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integrated database retrieval system
