Escherichia coli K-12 MG1655: b4000
Help
Entry
b4000 CDS
T00007
Symbol
hupA
Name
(RefSeq) DNA-binding protein HU-alpha
KO
K05787
DNA-binding protein HU-alpha
Organism
eco
Escherichia coli K-12 MG1655
Brite
KEGG Orthology (KO) [BR:
eco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eco03032
]
b4000 (hupA)
03036 Chromosome and associated proteins [BR:
eco03036
]
b4000 (hupA)
03400 DNA repair and recombination proteins [BR:
eco03400
]
b4000 (hupA)
DNA replication proteins [BR:
eco03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
b4000 (hupA)
Chromosome and associated proteins [BR:
eco03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
b4000 (hupA)
DNA repair and recombination proteins [BR:
eco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
b4000 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-GeneID:
948499
NCBI-ProteinID:
NP_418428
Pasteur:
hupA
RegulonDB:
ECK120000459
ECOCYC:
EG10466
ASAP:
ABE-0013077
UniProt:
P0ACF0
Structure
PDB
LinkDB
All DBs
Position
4200281..4200553
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagactcaactgattgatgtaattgcagagaaagcagaactgtccaaaacccag
gctaaagctgctctggagtccactctggctgcaattactgagtctctgaaagaaggcgat
gctgtacaactggttggtttcggtaccttcaaagtgaaccaccgcgctgagcgtactggc
cgcaacccgcagaccggtaaagaaatcaaaattgccgcagctaacgtaccggcatttgtt
tctggcaaggcactgaaagacgcagttaagtaa
DBGET
integrated database retrieval system