Saccharomyces cerevisiae (budding yeast): YMR128W
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Entry
YMR128W CDS
T00005
Symbol
ECM16, DHR1
Name
(RefSeq) ATP-dependent RNA helicase ECM16
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sce03009
]
YMR128W (ECM16)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
YMR128W (ECM16)
Ribosome biogenesis [BR:
sce03009
]
Eukaryotic type
90S particles
Helicases
YMR128W (ECM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
OB_NTP_bind
HA2_N
DEAD
AAA_22
ATPase
nSTAND3
AAA_19
ResIII
PhoH
TsaE
BSP
HTH_37
Motif
Other DBs
NCBI-GeneID:
855158
NCBI-ProteinID:
NP_013847
SGD:
S000004735
UniProt:
Q04217
Structure
PDB
LinkDB
All DBs
Position
XIII:523696..527499
Genome browser
AA seq
1267 aa
AA seq
DB search
MGTYRKRFNEKARSGHMAKLKELKRIRNKQFTRQDENDERVENPDSAPAESSTTEPNANA
EILEPLTEEEKKMKKRKLQELFTPKESKVSRLKKKRLDKFIEHQLKREERKTIIGKLQDY
KIDTSLLTSSKRLGEGRQTKKEEFKEALSLERQGRGNEQTNEILYEEYEPKVWDEYGEGG
SSEDDDGEDDFEASFGSMPKPTDNEEKKSSGFIDHRPAKFGGSGLSFGFSNIKVINKESK
TPKKKYNWRQRVEMEELKKHGKEDEMDFDTTSEDDDEEEDQEEEDKMHPSENPLEEVESA
DSETGSEKFDQNDVANEFKDWANQEIKKLEGRDQELVTPTLNIDYKPIIRKEDLDDGLQE
AYVPINENSTRKAFYVEVSRSDEIQKARIQLPVFGEEHKIMEAIHHNDVVIICGETGSGK
TTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRVAAVSMAERVANELGDHGHKVGYQIRFD
STAKEDTKVKFMTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRA
KLHKENPIEHKKLKLIIMSATLRVSDFSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAF
NYTDEAFRKTCKIHQKLPPGAILVFLTGQQEITHMVKRLRKEFPFKKNSKYNKDLETPVS
KMGINSKTTDLEAEDIDFSVQVIDQDKFKSAIRYEEDEGNSGNGEDEEDEEEEGFEEVLT
EGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSG
RSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKP
EILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGK
KMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFINEFELGINEISRKPNPDEN
LDDKIREHDESTPGMDPELKKELRSKFYKSRSQFSKLDKFSDVFRLLSVVSAMDYVPKEQ
KEIFMKKNFLRGKLMEEIVKLRKQLMYIIKSNTSKENIAVVIRNEDLKSDIPSVIQIKLL
KQMICAGFVDHVAVRADVLFPDDAKITNRTSIINIPYIPVLATRTPNIEDCFVYIHPTSI
LNNLGEMPPKYMLYYSLHLGGNNKTRMNTLCDIASTPLANIARKGLLLTYSKPLTGQGLK
TVNLSPTERYCYVVPRFGSTVDNDLKIGWDLNPIAVHQKKQKGQWTVIKFITRKGFQTIT
GEEKEKK
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttacagaaaaaggtttaatgaaaaagccagatccggccatatggccaaatta
aaagaactgaaaagaattaggaataagcagttcactagacaggatgaaaacgatgaaaga
gtagaaaacccagattcagctcccgctgagagttctactacggagccaaatgccaatgcg
gaaattcttgaacctctcactgaagaagaaaagaaaatgaagaaaagaaaactacaggag
ttatttaccccaaaggaatcgaaagtttcgagattgaagaagaaaagactggataaattt
attgaacatcaattaaaaagagaggaaagaaagacaattattggtaaacttcaagattat
aagatagatacaagtttgttgacaagctctaaaaggttaggagagggcaggcagactaaa
aaggaagaattcaaagaagcactgagtttagaacgtcaaggaagaggaaatgaacaaaca
aatgaaatattatacgaagaatatgaaccaaaagtttgggatgagtatggtgaaggaggg
agctctgaggatgatgacggcgaagatgatttcgaggcttcatttggtagtatgccgaaa
ccaacggacaatgaggagaagaaatcatcaggttttattgatcatagaccagcaaaattt
ggtggatctggtcttagctttgggtttagcaatataaaagtcataaacaaagaaagcaaa
actccgaagaagaaatataattggagacaacgagtagaaatggaagaattgaagaagcat
gggaaagaagatgaaatggatttcgacacgacatctgaagatgatgacgaagaggaggat
caggaagaagaagacaaaatgcatcctagtgaaaacccactcgaagaagttgaaagcgca
gatagtgaaactggctcagaaaaatttgaccaaaatgatgttgctaacgaattcaaggat
tgggccaatcaagaaataaaaaaattggaaggtagagatcaagagctagttactcccact
ttgaacatcgattataaaccgataattagaaaggaagatttagatgatggtctccaagaa
gcttatgttccaataaacgagaattccacccgtaaagccttctatgttgaagttagcaga
tcagatgaaattcagaaagcaagaattcaactaccagtatttggtgaagaacacaaaatt
atggaggctattcaccataatgatgtagtgattatttgtggtgaaacggggtcaggtaag
actacacaagtcccacaatttttatatgaggctgggtttggtgccgaagattctccagat
tacccaggaatggtgggtatcactcaaccaagaagagtggccgctgtgtccatggctgaa
cgtgtagctaatgaattgggggaccatggtcataaagtaggataccaaattaggtttgac
tctaccgcaaaggaggacacaaaggtcaagtttatgacagatggtgtcttgctacgagaa
atgatgcacgatttcaagttgactaaatattcctccattatcatagatgaagcacatgaa
agaaacattaacactgatattttgatcggtatgcttagccgttgtgttcggttaagagct
aaactacataaggagaacccgatcgagcacaagaagctaaaactcatcatcatgtcagct
acattaagggtatcagatttcagcgaaaacaaaacattgttccccatagcgccccctgtc
ttacaggttgatgcaaggcagtttccagtctctattcactttaatcgtagaactgcattc
aactatacagacgaggctttcagaaagacttgcaaaattcaccagaaacttcctcctggc
gctatattggtgtttttaaccggtcagcaggaaattacacacatggtaaaaaggctaaga
aaggaatttccttttaagaaaaactccaagtacaacaaagatttagaaacacccgtttct
aaaatgggtatcaattcaaaaacaacagatttggaggctgaggatatagacttcagtgta
caagttatcgatcaagataagttcaagagcgcgataagatacgaagaagatgaaggtaac
agtggaaacggtgaagatgaggaagacgaagaggaagaagggtttgaagaagtcctaact
gaagggcaaacagctaacgatcctttatatgtccttccactgtattctctattaccaacc
aaggaacaaatgagagtctttcaaaaacctcctcaaggttctaggctttgtattgttgca
acaaatgttgcagaaacatcgttaactatacctggagttagatatgttgttgattccggg
aggtctaaagagcgtaaatataatgaatcaaatggcgtacagagttttgaagtgggctgg
gtaagtaaagctagtgccaatcaaagaagcggtagagcaggtcgtactggaccaggccat
tgttaccgtttatattcgtctgctgtttttgaacatgatttcgaacagttctctaaacct
gaaatcttaagaatgccagtggagagcatcgtgttacaaatgaagagcatggccattcat
aatatcattaattttccatttccaactcctccagatagagttgccctttccaaggcaata
caattactgcaatatttaggtgctcttgataataaggagatgattactgaagatggtaaa
aaaatgagcctgttcccactttcacccagattttccaaaatgttacttgtttctgacgaa
aaagcctgccttccttatattgtagcaattgttagtgccctttcggtgggagatcctttt
atcaatgaatttgagttgggaataaacgaaatttctagaaaaccaaatccagatgaaaat
ctagatgataagattagagagcacgatgaatcaacaccaggtatggatcctgaactgaaa
aaggaattgcgcagtaaattctataaaagcaggagtcagtttagtaaattagacaaattt
agtgacgtattccgtttattaagtgttgtaagtgcaatggactacgttccaaaggaacaa
aaagaaatattcatgaagaaaaattttttaagaggcaaactaatggaagaaatagtaaaa
ttgaggaagcagttaatgtatatcatcaagtccaacacttcaaaagaaaatattgccgta
gtaattaggaatgaagacttgaaaagtgatattccaagcgtcatacaaataaaactttta
aaacaaatgatttgcgctggttttgtcgaccatgttgccgtaagagcagatgttttattt
ccagatgatgctaagataaccaacagaacttccataatcaacattccttatattcctgtt
ttggccacgagaacaccaaatatcgaggactgctttgtctatatccatccgacttcaatt
ttaaataatttgggggaaatgccacccaaatacatgctctattattccttgcaccttggt
ggaaataataaaacaaggatgaatactttatgtgacatcgcaagcacccccttagcgaac
atagcaagaaagggacttcttttgacatacagtaaacctctgactggtcaaggcttgaag
accgttaatttatcacctacggaacggtattgttatgtggttcctagatttggatccaca
gttgacaacgatctcaagattggttgggatttaaatcctatagcagtgcatcagaagaag
caaaaaggccagtggacagtcattaagtttatcaccagaaagggcttccagaccatcaca
ggtgaagagaaagaaaaaaaataa
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