Saccharomyces cerevisiae (budding yeast): YNR011C
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Entry
YNR011C CDS
T00005
Symbol
PRP2, RNA2
Name
(RefSeq) DEAH-box RNA-dependent ATPase PRP2
KO
K12814
pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 [EC:
5.6.2.6
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YNR011C (PRP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YNR011C (PRP2)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
YNR011C (PRP2)
Spliceosome [BR:
sce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
YNR011C (PRP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
ABC_tran
AAA_30
T2SSE
ATPase
PhoH
Helicase_RecD
DUF749
Motif
Other DBs
NCBI-GeneID:
855745
NCBI-ProteinID:
NP_014408
SGD:
S000005294
UniProt:
P20095
Structure
PDB
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All DBs
Position
XIV:complement(644320..646950)
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AA seq
876 aa
AA seq
DB search
MSSITSETGKRRVKRTYEVTRQNDNAVRIEPSSLGEEEDKEAKDKNSALQLKRSRYDPNK
VFSNTNQGPEKNNLKGEQLGSQKKSSKYDEKITSNNELTTKKGLLGDSENETKYASSNSK
FNVEVTHKIKNAKEIDKINRQRMWEEQQLRNAMAGQSDHPDDITLEGSDKYDYVFDTDAM
IDYTNEEDDLLPEEKLQYEARLAQALETEEKRILTIQEARKLLPVHQYKDELLQEIKKNQ
VLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGK
EVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIG
LLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHA
AITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQ
EQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVP
CSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVT
DLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAAT
HEQCQGVLEECLTIVSMLHETPSLFIGQKRDAAASVLSEVESDHILYLEIFNQWRNSKFS
RSWCQDHKIQFKTMLRVRNIRNQLFRCSEKVGLVEKNDQARMKIGNIAGYINARITRCFI
SGFPMNIVQLGPTGYQTMGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSK
EFIRDCLVIPKEEWLIDMVPQIFKDLIDDKTNRGRR
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtattacatctgaaaccggtaagcgaagagtgaaacgaacgtatgaagttaca
agacagaatgacaatgcagtaagaatagagccttcttccttgggtgaggaagaagacaaa
gaggccaaggataagaactctgccttgcagctaaaacgatcacgctatgaccccaataaa
gttttttctaatacgaaccaaggtccagaaaagaacaatttaaaaggagaacaacttgga
tcacaaaaaaagtcatcaaagtatgatgaaaaaataacgtcaaataatgaacttactaca
aagaagggtctactaggtgactccgagaatgaaactaagtacgcctcttctaattctaaa
tttaacgtagaagttactcataaaataaagaatgcaaaagaaattgacaaaataaacaga
caacgcatgtgggaagaacaacaattgcgaaatgctatggcggggcaaagcgatcaccct
gatgatataacattggaaggctctgacaagtacgattatgtgttcgacacagatgcaatg
attgattatactaatgaggaggacgatttactacctgaagagaaacttcaatatgaggca
cgtctagcacaagctttagaaactgaggaaaagcgtatactgactatacaagaggcaaga
aaacttttgcctgtacatcaatacaaggatgagctactacaagagatcaaaaaaaatcaa
gttttgattataatgggtgaaaccggttctggtaaaaccacacagttaccccaatatttg
gtagaagatggattcactgatcagggaaagttacagattgccataacacaaccacgtcgt
gtggcggccacttctgttgctgcaagagtagcagatgaaatgaatgttgtgcttgggaag
gaagtgggttatcagatccgttttgaagacaaaacaaccccaaataaaacggttctaaag
tatatgacggatggtatgttactaagagaatttcttacagattccaaattaagcaaatat
tcttgtattatgattgatgaagctcatgaacgtactctagccacagatatcctgataggt
ttgctgaaagatattttgccgcagaggcccactttaaaattgcttatatcatcagcaaca
atgaacgcaaaaaaattttcagagttttttgataattgtcccattttcaacgttcctggg
agaagatatcctgtagatatccactacacattacagccggaggcaaactatatacatgcc
gctataacaactatttttcaaattcatactacgcaaagtttaccgggggatatattggtg
tttttaacggggcaagaagaaattgaaagaacaaaaaccaaactggaggagatcatgtct
aaattaggttctagaacaaaacaaatgattataactcctatatacgcaaatttaccccaa
gagcagcaattgaaaattttccagccgactccggaaaattgtaggaaagttgttttggca
actaatattgcggaaacttcattgaccattgatggtattagatatgtcattgatcctgga
tttgttaaggaaaattcgtacgtaccctccactggaatgacccaacttttaacagttcca
tgctcaagagcttcagttgatcagcgtgccggtagggctggtcgtgttgggccgggaaaa
tgttttagaatttttaccaaatggtcatatttgcacgagttggaacttatgcctaagcct
gagatcacaagaacaaatctttctaatacggtgttattattattatcgcttggcgttact
gacctaataaagtttcccctgatggataagcccagtatccccacattacggaagtctttg
gaaaatttatacattttaggtgccttaaatagcaaagggacaatcactcggttaggtaaa
atgatgtgcgagtttccttgtgaacctgaatttgcaaaagtgctttatacagctgctacg
cacgaacaatgtcaaggtgtactagaagagtgtttgaccatagtttcgatgctacatgaa
acaccttcattatttattggtcaaaaaagagatgctgcggcaagtgtgttaagcgaagtg
gaaagtgatcacatattgtatttggaaatcttcaaccaatggagaaactctaaattttcc
agaagttggtgtcaagaccacaaaattcaattcaaaacgatgttgagggtaagaaatatt
agaaaccaattattcaggtgcagtgaaaaggttggattagttgaaaagaacgaccaagcc
aggatgaagataggcaatatagcgggctacataaatgctagaataactcgatgcttcatc
agcgggtttccgatgaatattgtacaattaggccccaccggctatcaaaccatgggtagg
tcatcaggtgggctgaacgttagtgttcatcctaccagtatacttttcgttaatcataag
gaaaaggcgcagagaccaagcaaatatgtgctttatcaacaattgatgctaacgtcgaag
gaatttatcagggactgtctagttatccctaaggaagaatggttgatagacatggttcca
caaatctttaaagatttaattgacgataaaacaaatagggggaggcggtga
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