Saccharomyces cerevisiae (budding yeast): YNL147W
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Entry
YNL147W CDS
T00005
Symbol
LSM7
Name
(RefSeq) Sm-like protein LSM7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03018
RNA degradation
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YNL147W (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
YNL147W (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YNL147W (LSM7)
03041 Spliceosome [BR:
sce03041
]
YNL147W (LSM7)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
YNL147W (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
YNL147W (LSM7)
Spliceosome [BR:
sce03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
YNL147W (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
855575
NCBI-ProteinID:
NP_014252
SGD:
S000005091
UniProt:
P53905
Structure
PDB
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All DBs
Position
XIV:join(350940..350957,351054..351383)
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AA seq
115 aa
AA seq
DB search
MHQQHSKSENKPQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMN
LVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVLYMQK
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcaacactccaaatcagagaacaaaccacaacagcaaaggaaaaaattcgaa
ggccctaaaagagaagctattctggatttagcgaagtataaagattctaaaattcgcgtc
aaattaatgggtggtaaattagttataggtgtcctaaaaggctatgatcaactgatgaac
ttggtacttgatgatacagtagaatatatgtctaatcctgatgatgaaaacaacactgaa
ctgatttctaaaaacgcaagaaagctaggtttgaccgtcataagaggtactattttggtc
tctttaagttccgccgaaggttctgatgtactatatatgcaaaaatag
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