KEGG   Saccharomyces cerevisiae (budding yeast): YNL147W
Entry
YNL147W           CDS       T00005                                 
Symbol
LSM7
Name
(RefSeq) Sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce03018  RNA degradation
sce03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    YNL147W (LSM7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    YNL147W (LSM7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sce03019]
    YNL147W (LSM7)
   03041 Spliceosome [BR:sce03041]
    YNL147W (LSM7)
Messenger RNA biogenesis [BR:sce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     YNL147W (LSM7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     YNL147W (LSM7)
Spliceosome [BR:sce03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    YNL147W (LSM7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 855575
NCBI-ProteinID: NP_014252
SGD: S000005091
UniProt: P53905
Structure
LinkDB
Position
XIV:join(350940..350957,351054..351383)
AA seq 115 aa
MHQQHSKSENKPQQQRKKFEGPKREAILDLAKYKDSKIRVKLMGGKLVIGVLKGYDQLMN
LVLDDTVEYMSNPDDENNTELISKNARKLGLTVIRGTILVSLSSAEGSDVLYMQK
NT seq 348 nt   +upstreamnt  +downstreamnt
atgcatcagcaacactccaaatcagagaacaaaccacaacagcaaaggaaaaaattcgaa
ggccctaaaagagaagctattctggatttagcgaagtataaagattctaaaattcgcgtc
aaattaatgggtggtaaattagttataggtgtcctaaaaggctatgatcaactgatgaac
ttggtacttgatgatacagtagaatatatgtctaatcctgatgatgaaaacaacactgaa
ctgatttctaaaaacgcaagaaagctaggtttgaccgtcataagaggtactattttggtc
tctttaagttccgccgaaggttctgatgtactatatatgcaaaaatag

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