Saccharomyces cerevisiae (budding yeast): YGR195W
Help
Entry
YGR195W CDS
T00005
Symbol
SKI6, ECM20, RRP41
Name
(RefSeq) exosome non-catalytic core subunit SKI6
KO
K11600
exosome complex component RRP41
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YGR195W (SKI6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YGR195W (SKI6)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
YGR195W (SKI6)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
YGR195W (SKI6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
853109
NCBI-ProteinID:
NP_011711
SGD:
S000003427
UniProt:
P46948
Structure
PDB
LinkDB
All DBs
Position
VII:888882..889622
Genome browser
AA seq
246 aa
AA seq
DB search
MSRLEIYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPR
LKSQMDTSKALLNVSVNITKFSKFERSKSSHKNERRVLEIQTSLVRMFEKNVMLNIYPRT
VIDIEIHVLEQDGGIMGSLINGITLALIDAGISMFDYISGISVGLYDTTPLLDTNSLEEN
AMSTVTLGVVGKSEKLSLLLVEDKIPLDRLENVLAIGIAGAHRVRDLMDEELRKHAQKRV
SNASAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagactagaaatatactcgccagaagggctacgtctcgatggacgtcgatggaat
gaactccgccgttttgaaagttccatcaacacacatccgcacgctgcagacggttcatcc
tacatggaacaaggtaacaacaaaattatcactcttgttaaaggtccaaaagagccaaga
ttgaaatctcaaatggatacctcaaaggctttattgaacgtatcggtaaacattacaaaa
ttctccaaattcgaaagaagtaaatcaagccacaagaatgaaaggcgtgttcttgagata
caaacctccctggtgaggatgtttgagaagaatgtcatgctgaatatctaccccagaaca
gttatcgatatcgagatccatgtccttgagcaagatggcggtattatgggatctttaatc
aacggtattaccctcgctttaatagatgccggtatatcaatgttcgattacataagtggt
atatccgtcgggctgtacgatactaccccattattagataccaattcattagaagaaaat
gctatgagtacagtgacactaggtgtggtagggaagtcagaaaaactttctcttttattg
gtggaagacaaaattccgttagataggttagagaacgttcttgccatcggcatcgcaggt
gctcatagggtaagagatttgatggatgaagaactgaggaaacatgctcagaaaagagtc
agtaacgcctctgctaggtag
DBGET
integrated database retrieval system
