Saccharomyces cerevisiae (budding yeast): YOR204W
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Entry
YOR204W CDS
T00005
Symbol
DED1, SPP81
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase DED1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YOR204W (DED1)
03041 Spliceosome [BR:
sce03041
]
YOR204W (DED1)
03036 Chromosome and associated proteins [BR:
sce03036
]
YOR204W (DED1)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YOR204W (DED1)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
YOR204W (DED1)
mRNA cycle factors
Common to processing body (P body) and stress granule
YOR204W (DED1)
Spliceosome [BR:
sce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
YOR204W (DED1)
Chromosome and associated proteins [BR:
sce03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
YOR204W (DED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CMS1
Motif
Other DBs
NCBI-GeneID:
854379
NCBI-ProteinID:
NP_014847
SGD:
S000005730
UniProt:
P06634
Structure
PDB
LinkDB
All DBs
Position
XV:722911..724725
Genome browser
AA seq
604 aa
AA seq
DB search
MAELSEQVQNLSINDNNENGYVPPHLRGKPRSARNNSSNYNNNNGGYNGGRGGGSFFSNN
RRGGYGNGGFFGGNNGGSRSNGRSGGRWIDGKHVPAPRNEKAEIAIFGVPEDPNFQSSGI
NFDNYDDIPVDASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGR
DLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQ
IFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANV
KYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYI
FLSVGRVGSTSENITQKVLYVENQDKKSALLDLLSASTDGLTLIFVETKRMADQLTDFLI
MQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDV
DDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLKDAMMSAPGSR
SNSRRGGFGRNNNRDYRKAGGASAGGWGSSRSRDNSFRGGSGWGSDSKSSGWGNSGGSNN
SSWW
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggctgaactgagcgaacaagtgcaaaatttaagcatcaacgacaacaacgagaatggt
tatgttcctcctcacttaagaggaaaaccaagaagtgccagaaataacagtagcaactac
aataacaacaacggcggctacaacggtggccgtggcggtggcagcttctttagcaacaac
cgtcgtggtggttacggcaacggtggtttcttcggtggaaacaacggtggcagcagatct
aacggccgttctggtggtagatggatcgatggcaaacatgtcccagctccaagaaacgaa
aaggccgagatcgccatatttggtgtccccgaggatccaaatttccaatcttctggtatt
aacttcgataactacgatgatattccagtggacgcctctggtaaggatgttcctgaacca
atcacagaatttacctcacctccattggacggattgttattggaaaacatcaaattggcc
cgtttcaccaagccaacacctgtgcaaaaatactccgtccctatcgttgccaacggcaga
gatttgatggcctgtgcgcagaccggttctggtaagactggtgggtttttattcccagtg
ttgtccgaatcatttaagactggaccatctcctcaaccagagtctcaaggctccttttac
caaagaaaggcctacccaactgctgtcattatggctccaactagagagttggccacccaa
attttcgatgaagccaagaaatttacttatagatcctgggtcaaggcctgcgtcgtctac
ggtggttctccaattggtaaccaactaagagaaattgaacgtggttgcgatcttttagtc
gctactccaggtcgtttgaatgacttgttggaacgtggtaaaatttctttggccaacgtc
aagtatttggttctagatgaagctgatagaatgttggatatgggtttcgaacctcaaatt
agacatattgtcgaagactgtgatatgactcctgttggtgaaagacaaactctgatgttc
tcagctacttttcccgctgatatccaacatttggcccgtgatttcttaagtgactacatc
tttttgtctgttggtagagtcggttctacttcagaaaacattactcaaaaagtcttatac
gttgaaaatcaagataagaagtcagccttattggatctattgtctgcatccactgacggt
ttgactttgatctttgtcgaaactaagagaatggcagatcaattgaccgatttcctgatc
atgcaaaactttagagctaccgccattcatggtgaccgtacccaatctgagagagaacgt
gccttggccgccttcagatctggtgccgctactttattggttgccacagctgtcgcagct
agaggtctagatattccaaacgtcacccacgttatcaactacgatttaccaagtgatgtc
gatgattacgtccatagaattggtagaactggtcgtgccggtaacaccggtcttgccact
gcctttttcaacagtgaaaacagtaacattgttaaaggtttgcatgaaattttgactgaa
gctaaccaagaagtcccatcattcttgaaggacgctatgatgagtgctccaggtagcaga
agcaacagccgtagaggcggtttcggtcgcaacaacaacagagattaccgtaaggccgga
ggcgctagcgcaggcggctggggctcttcaagaagcagagataactctttcagaggcggt
agtggctggggtagcgattccaagtcttctggctggggtaacagcggtggttcaaacaac
tcttcttggtggtga
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integrated database retrieval system
