Saccharomyces cerevisiae (budding yeast): YLR175W
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Entry
YLR175W CDS
T00005
Symbol
CBF5
Name
(RefSeq) pseudouridine synthase CBF5
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YLR175W (CBF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sce03009
]
YLR175W (CBF5)
03032 DNA replication proteins [BR:
sce03032
]
YLR175W (CBF5)
Ribosome biogenesis [BR:
sce03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
YLR175W (CBF5)
Prokaryotic type
YLR175W (CBF5)
DNA replication proteins [BR:
sce03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
YLR175W (CBF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
850872
NCBI-ProteinID:
NP_013276
SGD:
S000004165
UniProt:
P33322
Structure
PDB
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All DBs
Position
XII:506134..507585
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AA seq
483 aa
AA seq
DB search
MSKEDFVIKPEAAGASTDTSEWPLLLKNFDKLLVRSGHYTPIPAGSSPLKRDLKSYISSG
VINLDKPSNPSSHEVVAWIKRILRCEKTGHSGTLDPKVTGCLIVCIDRATRLVKSQQGAG
KEYVCIVRLHDALKDEKDLGRSLENLTGALFQRPPLISAVKRQLRVRTIYESNLIEFDNK
RNLGVFWASCEAGTYMRTLCVHLGMLLGVGGHMQELRRVRSGALSENDNMVTLHDVMDAQ
WVYDNTRDESYLRSIIQPLETLLVGYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELY
DEIVLITTKGEAIAVAIAQMSTVDLASCDHGVVASVKRCIMERDLYPRRWGLGPVAQKKK
QMKADGKLDKYGRVNENTPEQWKKEYVPLDNAEQSTSSSQETKETEEEPKKAKEDSLIKE
VETEKEEVKEDDSKKEKKEKKDKKEKKEKKEKKDKKEKKEKKEKKRKSEDGDSEEKKSKK
SKK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaggaggatttcgttattaagcctgaagctgcaggtgcttccactgacactagt
gaatggccattacttttgaagaattttgataagttattagtcagaagtggtcattatacc
cctatcccagctggtagttcaccactaaagagagacctgaaatcatatatcagctctggt
gtcattaatctagataaaccttccaacccatcatcgcacgaagttgtagcttggatcaaa
agaatcttacgttgtgagaagactggtcactctggtacattggatccaaaagttacaggt
tgtttgattgtttgtattgacagagctaccaggttggttaagtctcaacaaggtgctggt
aaggagtatgtgtgtattgtcagattgcatgatgctttgaaggatgaaaaggatttgggc
cgctcactagaaaacttgaccggtgcgcttttccaaagacctcctttaatctctgctgtt
aagagacaattacgtgttcgtactatctatgagtcaaacttgattgagttcgataacaag
agaaacttaggtgttttctgggcttcctgtgaagctggtacttatatgcgtactttgtgt
gttcatttaggtatgctattaggtgttggtggtcacatgcaagaattgcgtcgtgttaga
tccggtgctctgtctgaaaatgacaacatggtcactttacatgatgttatggatgcccaa
tgggtttacgacaatacaagagatgaatcttacttgagatccattattcaacctttagaa
actctattggttggttacaagagaattgtagtgaaggattctgctgtcaatgcagtatgt
tatggtgcaaagttgatgatccctggtttattgcgttacgaagaaggtattgagttatat
gacgaaattgtcttgataactaccaagggtgaagccattgccgttgccatcgcacaaatg
tcaaccgttgacttagcttcctgtgatcatggtgttgttgctagtgtgaagagatgtatc
atggaaagagatttatacccaagaagatggggtttgggtccagtcgcacaaaagaagaag
caaatgaaggcagacggcaaattggataaatacggccgtgttaacgaaaacaccccagaa
caatggaaaaaagaatatgttccattagacaatgctgaacagtcaacttctagctctcag
gaaactaaggaaactgaagaagagcctaagaaagctaaagaagattctttaatcaaagaa
gtcgaaactgagaaggaagaagtgaaagaggatgacagcaaaaaggaaaagaaagagaag
aaggacaagaaggaaaagaaggaaaagaaagaaaagaaggacaagaaggaaaagaaagag
aaaaaggagaagaaaagaaagtctgaagacggtgattctgaggaaaagaaatctaagaaa
tctaagaaatga
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