KEGG   Saccharomyces cerevisiae (budding yeast): YGR048W
Entry
YGR048W           CDS       T00005                                 
Symbol
UFD1
Name
(RefSeq) polyubiquitin-binding protein UFD1
  KO
K14016  ubiquitin fusion degradation protein 1
Organism
sce  Saccharomyces cerevisiae (budding yeast)
Pathway
sce04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:sce00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    YGR048W (UFD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sce03009]
    YGR048W (UFD1)
Ribosome biogenesis [BR:sce03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    YGR048W (UFD1)
SSDB
Motif
Pfam: UFD1
Other DBs
NCBI-GeneID: 852939
NCBI-ProteinID: NP_011562
SGD: S000003280
UniProt: P53044
Structure
LinkDB
Position
VII:589826..590911
AA seq 361 aa
MFSGFSSFGGGNGFVNMPQTFEEFFRCYPIAMMNDRIRKDDANFGGKIFLPPSALSKLSM
LNIRYPMLFKLTANETGRVTHGGVLEFIAEEGRVYLPQWMMETLGIQPGSLLQISSTDVP
LGQFVKLEPQSVDFLDISDPKAVLENVLRNFSTLTVDDVIEISYNGKTFKIKILEVKPES
SSKSICVIETDLVTDFAPPVGYVEPDYKALKAQQDKEKKNSFGKGQVLDPSVLGQGSMST
RIDYAGIANSSRNKLSKFVGQGQNISGKAPKAEPKQDIKDMKITFDGEPAKLDLPEGQLF
FGFPMVLPKEDEESAAGSKSSEQNFQGQGISLRKSNKRKTKSDHDSSKSKAPKSPEVIEI
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgttttctggctttagttcttttggcggcggaaatggttttgtaaatatgcctcaaacg
tttgaggagttctttagatgctaccctatagctatgatgaatgatagaatacggaaggat
gacgcaaacttcggcgggaaaatattcctgccaccaagtgctctaagcaaactatccatg
ttgaacataagataccccatgctttttaaactaactgccaatgaaactggacgtgtgaca
catggaggtgttttagaatttattgctgaagagggcagagtttacttaccacaatggatg
atggaaactttgggtatacagccaggatctctactgcaaatttcatctactgatgtacct
ctgggccagtttgtgaagttagaacctcagtctgtagatttcttggatatttccgacccc
aaagcagttttggaaaacgtactgaggaatttctcgactttgaccgtggacgatgttatt
gagattagttacaatggtaaaactttcaaaattaagatcttagaagtcaaaccagaatca
tcatcgaagagtatatgtgtcattgaaacagatttagtaacagattttgctccacctgta
ggatatgtggaaccggattacaaagcgctgaaagctcagcaagataaagaaaaaaagaat
tcttttggtaagggccaagttttggatccctcggtgcttggccagggatcgatgtccaca
agaatcgactatgcgggtatcgctaacagtagcagaaacaaactatctaaatttgtaggt
cagggacaaaacatatctggtaaagctccgaaagcggagcccaagcaagatataaaagat
atgaagataacgtttgatggcgagcccgccaagctagatctgcctgaaggccaattattc
tttggtttcccaatggtcctaccgaaagaagacgaagaaagtgccgctggtagcaaatcc
agtgaacaaaatttccaaggccaagggatctcactaaggaagagcaataagagaaaaacg
aaaagtgaccatgattcgtccaagtccaaggctcccaaaagcccggaagtaatcgaaatt
gactaa

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