Saccharomyces cerevisiae (budding yeast): YBR055C
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Entry
YBR055C CDS
T00005
Symbol
PRP6, RNA6, TSM7269
Name
(RefSeq) U4/U6-U5 snRNP complex subunit PRP6
KO
K12855
pre-mRNA-processing factor 6
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YBR055C (PRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YBR055C (PRP6)
Spliceosome [BR:
sce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
YBR055C (PRP6)
Complex C
U5 SnRNP specific factors
YBR055C (PRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
PRP1_N
TPR_19
TPR_12
TPR_16
TPR_8
SPO22
COG2_C
Motif
Other DBs
NCBI-GeneID:
852344
NCBI-ProteinID:
NP_009611
SGD:
S000000259
UniProt:
P19735
Structure
PDB
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All DBs
Position
II:complement(344602..347301)
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AA seq
899 aa
AA seq
DB search
MERPSFLDQEPPAGYVPGIGRGATGFSTKEKQVVSNDDKGRRIPKRYRENLNNHLQSQPK
DDEDDEAANVFKTLELKLAQKKKKRANEKDDDNSVDSSNVKRQFADLKESLAAVTESEWM
DIPDATDFTRRNKRNRIQEQLNRKTYAAPDSLIPGNVDLNKLTEEREKLLQSQIDENLAQ
LTKNASNPIQVNKPNAATDALSYLKDLENDRVNSLSDATLEDLQKMRTILKSYRKADPTN
PQGWIASARLEEKARKFSVAKKIIENGCQECPRSSDIWLENIRLHESDVHYCKTLVATAI
NFNPTSPLLWFKAIDLESTTVNKYRVVRKALQEIPRDEGLWKLAVSFEADKAQVIKMLEK
ATQFIPQSMDLLTAYTNLQSYHNAKMTLNSFRKILPQEPEIWIISTLLEERNNPDIPVDK
LVSLLKEGLLELSKNGYKATLSAWLKRAEALNDAPNSNLTCQAIVYAILEWLRESGEYES
ELNNVDQILEKMPHSKVQIAVLKKLIQWDPCDTVLWSRLKMATESYHKIEELLAFFQELL
FQTKNSDDIRANMREKSPGLLMMYVSEYWKAQKGDTRQTLVLIDQIIDFAPHNLDLRFFK
IKLLGRSLQLDELRDFFQQTFSSLEDFKISGTERLYYKYVNFLRYQDLNEEAIKFLNERC
LKSFPICHKFFLQLGQIYHSMGNIEMSRETYLSGTRLVPNCPLLWVSLSKIDEIDLKNPV
RARSILDRGLLKNPDDVLFYIAKIQMEIRLGNLDQAELLVTQALQKFPSNALLWVEQIKL
FKHGNKSSLKKTIFQDALRRTQNDHRVLLEIGVSFYAEAQYETSLKWLERALKKCSRYGD
TWVWLFRTYARLGKDTVDLYNMFDQCEPTYGPEWIAASKNVKMQYCTPREILLRLMNDK
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggagaggccatcttttttggatcaagaaccacctgcaggttacgtaccaggtattggt
cgtggagccactggattttcaacaaaagaaaagcaagtggttagtaatgatgacaaagga
agaagaataccgaaaaggtaccgtgaaaatttgaacaaccatcttcaaagccaaccgaaa
gatgatgaagatgatgaagctgcaaatgtattcaaaacgcttgaattgaaattagcacaa
aagaaaaagaaaagagctaatgaaaaggatgatgacaattcagttgattcttcaaacgtg
aaacggcaatttgccgatttgaaagaatcattagctgctgtaacggagagtgagtggatg
gatattccggatgccacagattttacaagaagaaacaagagaaatagaattcaagagcaa
ttaaacagaaaaacttatgctgcaccggattcgctaatacctgggaatgttgatttaaat
aaattaacggaagaacgagaaaaattattgcaatctcaaatagatgagaatcttgcacaa
ttaacgaagaatgcaagtaaccctatacaggttaataaaccgaacgctgctaccgatgcc
ctaagttacttaaaggacttagaaaacgatagagtaaattctctctcagacgcaacgtta
gaagatttacagaaaatgcgcacaattttaaagtcatacagaaaggccgatccaacaaat
ccacagggttggatagcttctgccagattagaagaaaaggcaagaaaattttcagtagca
aaaaaaataatagaaaatggttgccaagagtgccctcgaagctccgatatttggctagaa
aacattagactacacgaatctgatgttcactactgtaaaacattagtggcaacggcaata
aattttaatccaacgtctccgcttctttggttcaaagctattgatttggaaagcacaacg
gttaacaaatatagagtagtgagaaaagcactgcaagagattcctcgagatgagggccta
tggaagctagctgtcagttttgaagctgacaaagcgcaagttataaaaatgttagagaaa
gccacacaatttattccacaaagtatggatctcttgactgcatatactaatttgcaaagc
tatcataatgctaaaatgactttgaattccttcagaaaaatccttccgcaagaaccggaa
atttggattatctctacactcttggaagaacgaaataacccagatatacctgtagataaa
ctagttagtttgctcaaggagggtttattggaactctctaaaaatgggtacaaagcgacc
ttgtcagcatggttgaaacgtgcagaggctctaaatgatgcgcccaattcaaatttaacc
tgtcaagccatcgtttacgctatattagaatggttaagagaaagtggcgagtatgagtct
gagttgaataatgttgatcagatattagaaaaaatgccacactcaaaggtacaaattgct
gtcttaaaaaagcttattcagtgggatccttgtgatacagttctttggtctagactgaaa
atggccactgaaagctaccataaaattgaagagttattagcatttttccaggagctgcta
tttcagaccaagaatagtgatgatatacgagcaaatatgagggagaaaagccctggcttg
ttaatgatgtatgtaagcgaatattggaaggcccaaaaaggggatactaggcaaacacta
gttttgattgaccagattatagatttcgccccgcataatttggatttacgctttttcaag
ataaagttattaggtcgttcactacaacttgatgaattacgagatttttttcagcaaact
ttctcctctttagaggattttaagatcagtggcacggaaagattatattataaatacgta
aactttctgcggtaccaagatctgaatgaagaggctataaaattcttgaatgagagatgt
ttgaaatcatttcccatctgccacaaattttttttacagctgggtcaaatttatcattcc
atgggcaatattgaaatgagtagagaaacctatttgtctggtacaaggttagtgcccaat
tgccctttattatgggtttccctatcaaagattgacgagattgatctaaaaaatccagta
agggcaagatcaattttagatagaggattgttaaaaaatcctgacgatgtattattttac
attgctaaaatccaaatggaaataagacttggtaacttagatcaggcggagttactcgtc
acacaggcattgcaaaagtttccaagcaatgctttactttgggtggagcaaatcaagctg
tttaagcatggaaacaaaagttcgttaaaaaaaacaatttttcaagatgctttaagaagg
acacaaaacgatcatcgcgttcttttggagattggagtatccttttatgcagaagcgcaa
tatgaaacatcattaaaatggttagaaagagctctgaaaaagtgctcgcgttacggagat
acatgggtttggctatttaggacatatgcaaggttaggcaaggatactgttgatctctac
aatatgttcgatcaatgtgagcctacttacggacccgaatggatagccgcctccaagaac
gtaaaaatgcaatactgcacacctagagagattttattgcgcttgatgaatgacaaataa
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