Saccharomyces cerevisiae (budding yeast): YKR002W
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Entry
YKR002W CDS
T00005
Symbol
PAP1
Name
(RefSeq) polynucleotide adenylyltransferase PAP1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
YKR002W (PAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sce03019
]
YKR002W (PAP1)
Enzymes [BR:
sce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
YKR002W (PAP1)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
YKR002W (PAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
Polbeta
Motif
Other DBs
NCBI-GeneID:
853871
NCBI-ProteinID:
NP_012927
SGD:
S000001710
UniProt:
P29468
Structure
PDB
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All DBs
Position
XI:443232..444938
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AA seq
568 aa
AA seq
DB search
MSSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQ
RFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVF
DSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNL
DEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLV
ARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRM
PVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKF
YLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDD
YEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVD
IHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNLDA
RHETVKRSKSDAASGDNINGTTAAVDVN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcaaaaggtttttggtattactggacctgtttccaccgtgggcgccacagca
gcagaaaataaattaaatgatagtttaatccaagaactgaaaaaggaaggatcgttcgaa
acagagcaagaaactgccaatagggtacaagtgttgaaaatattgcaggaattggcacaa
agatttgtttatgaagtatcgaagaagaaaaatatgtcagacgggatggcaagggatgct
ggtgggaagatttttacgtatgggtcctatagactaggagtccatgggcctggtagtgat
atcgatactttggtagttgttccaaaacatgtaactcgggaagatttttttacggtattt
gattcactactgagagagaggaaggaactggatgaaattgcacctgtacctgatgcgttt
gtcccgattatcaagataaagttcagtggtatttctatcgatttaatctgtgcacgtcta
gaccaacctcaagtgcctttatccttgactttatcagataaaaatctactgcgaaatcta
gacgagaaggacttgagagctttgaatggtaccagagtaacagatgagatattagaactg
gtaccaaagccgaatgttttcagaatcgctttaagagctattaagctatgggcccaaaga
agggctgtttatgctaatatttttggttttcctggtggtgtggcttgggccatgctagtg
gctagaatttgtcaactataccctaacgcctgtagcgcagttatattgaacagatttttc
atcattttgtcggaatggaattggccacaacctgttatcttgaaaccaattgaggatggc
ccgttacaagttcgtgtatggaatccaaagatatatgcccaagacaggtctcatagaatg
cccgtcattacaccagcttatccatcaatgtgtgctacccataacatcacggaatctact
aaaaaagtcattttacaggaattcgtaagaggcgttcaaattacgaatgatattttttcc
aataagaagtcctgggccaatttattcgaaaaaaacgattttttctttcgatacaagttc
tatttagaaattactgcatatacaaggggcagtgacgagcagcatttaaaatggagtggt
cttgttgaaagtaaggtaaggcttctagttatgaaactggaggtgttagctggaataaaa
attgcacatcctttcaccaaaccctttgaaagtagttattgttgtccaaccgaggatgac
tatgaaatgattcaagacaaatacggtagtcataaaactgagacagcactgaacgccctt
aaactggtaacagatgaaaataaagaggaagaaagtattaaagatgcaccaaaggcatat
ttaagcaccatgtacataggccttgactttaatattgaaaacaaaaaggaaaaagttgac
attcacattccctgcactgaatttgtgaatttatgtcgaagtttcaatgaggattatggt
gaccacaaagtattcaatctagccctccgcttcgtaaagggttacgatttgccagatgaa
gttttcgatgaaaatgaaaagagaccatcaaagaagagtaaaaggaagaatttagatgct
agacatgaaaccgtgaagagatctaaatcagatgctgcttcaggtgacaacatcaatggc
acaaccgcagctgttgacgtaaactaa
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