Saccharomyces cerevisiae (budding yeast): YDL108W
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Entry
YDL108W CDS
T00005
Symbol
KIN28
Name
(RefSeq) TFIIH complex serine/threonine-protein kinase subunit KIN28
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03022
Basal transcription factors
sce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
YDL108W (KIN28)
09124 Replication and repair
03420 Nucleotide excision repair
YDL108W (KIN28)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sce01001
]
YDL108W (KIN28)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sce03021
]
YDL108W (KIN28)
03019 Messenger RNA biogenesis [BR:
sce03019
]
YDL108W (KIN28)
03400 DNA repair and recombination proteins [BR:
sce03400
]
YDL108W (KIN28)
Enzymes [BR:
sce01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
YDL108W (KIN28)
2.7.11.23 [RNA-polymerase]-subunit kinase
YDL108W (KIN28)
Protein kinases [BR:
sce01001
]
Serine/threonine kinases: CMGC group
CDK family
YDL108W (KIN28)
Transcription machinery [BR:
sce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
YDL108W (KIN28)
Messenger RNA biogenesis [BR:
sce03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
YDL108W (KIN28)
DNA repair and recombination proteins [BR:
sce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
YDL108W (KIN28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
APH
ABC1
Kinase-like
Motif
Other DBs
NCBI-GeneID:
851450
NCBI-ProteinID:
NP_010175
SGD:
S000002266
UniProt:
P06242
Structure
PDB
LinkDB
All DBs
Position
IV:join(267698..267725,267807..268699)
Genome browser
AA seq
306 aa
AA seq
DB search
MKVNMEYTKEKKVGEGTYAVVYLGCQHSTGRKIAIKEIKTSEFKDGLDMSAIREVKYLQE
MQHPNVIELIDIFMAYDNLNLVLEFLPTDLEVVIKDKSILFTPADIKAWMLMTLRGVYHC
HRNFILHRDLKPNNLLFSPDGQIKVADFGLARAIPAPHEILTSNVVTRWYRAPELLFGAK
HYTSAIDIWSVGVIFAELMLRIPYLPGQNDVDQMEVTFRALGTPTDRDWPEVSSFMTYNK
LQIYPPPSRDELRKRFIAASEYALDFMCGMLTMNPQKRWTAVQCLESDYFKELPPPSDPS
SIKIRN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaatatggagtacacaaaggaaaagaaagttggtgagggtacttatgcggtt
gtttacttgggttgtcaacactctactggaagaaagattgctattaaggagatcaaaaca
tccgaatttaaagatggtttagatatgtcagctatccgtgaagttaagtacctccaagaa
atgcagcatccgaacgtcatagaactaatagacatatttatggcttatgataatttaaat
ctcgttctggagttcctaccaactgatctagaggtggtaataaaagacaaatcaatactg
tttacaccagcagatattaaggcatggatgcttatgactttgaggggcgtgtatcattgc
cacagaaatttcattttgcacagggatctgaaaccaaacaatttattattttcacctgat
ggccagataaaagtagcagatttcggtctagcaagggcgataccggccccacatgagata
ctgacaagtaacgtcgtaacaagatggtatagagcgccagaattgttgtttggagctaaa
cattacacatcggctattgatatctggtcagtaggcgttatattcgcggaattaatgcta
aggataccttatttaccaggacagaatgatgtcgatcaaatggaagtaacgttcagggcc
ttagggacacctacagatagagattggcccgaagtttcttcctttatgacgtataacaag
ttacaaatatatccgcccccttcaagagatgaattgaggaaaaggttcattgctgctagc
gaatacgccttagattttatgtgtggaatgctaacgatgaacccacaaaagaggtggacc
gctgttcagtgtttagaaagtgattatttcaaagaattaccaccaccaagtgacccgtct
tcaataaaaatacgtaactga
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