Saccharomyces cerevisiae (budding yeast): YER172C
Help
Entry
YER172C CDS
T00005
Symbol
BRR2, PRP44, RSS1, SLT22, SNU246
Name
(RefSeq) ATP-dependent RNA helicase BRR2
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YER172C (BRR2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YER172C (BRR2)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
YER172C (BRR2)
Spliceosome [BR:
sce03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
YER172C (BRR2)
Complex C
U5 SnRNP specific factors
YER172C (BRR2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
BRR2_plug
Helicase_PWI
ResIII
Helicase_C
AAA_22
AAA_30
Motif
Other DBs
NCBI-GeneID:
856919
NCBI-ProteinID:
NP_011099
SGD:
S000000974
UniProt:
P32639
Structure
PDB
LinkDB
All DBs
Position
V:complement(529530..536021)
Genome browser
AA seq
2163 aa
AA seq
DB search
MTEHETKDKAKKIREIYRYDEMSNKVLKVDKRFMNTSQNPQRDAEISQPKSMSGRISAKD
MGQGLCNNINKGLKENDVAVEKTGKSASLKKIQQHNTILNSSSDFRLHYYPKDPSNVETY
EQILQWVTEVLGNDIPHDLIIGTADIFIRQLKENEENEDGNIEERKEKIQHELGINIDSL
KFNELVKLMKNITDYETHPDNSNKQAVAILADDEKSDEEEVTEMSNNANVLGGEINDNED
DDEEYDYNDVEVNSKKKNKRALPNIENDIIKLSDSKTSNIESVPIYSIDEFFLQRKLRSE
LGYKDTSVIQDLSEKILNDIETLEHNPVALEQKLVDLLKFENISLAEFILKNRSTIFWGI
RLAKSTENEIPNLIEKMVAKGLNDLVEQYKFRETTHSKRELDSGDDQPQSSEAKRTKFSN
PAIPPVIDLEKIKFDESSKLMTVTKVSLPEGSFKRVKPQYDEIHIPAPSKPVIDYELKEI
TSLPDWCQEAFPSSETTSLNPIQSKVFHAAFEGDSNMLICAPTGSGKTNIALLTVLKALS
HHYNPKTKKLNLSAFKIVYIAPLKALVQEQVREFQRRLAFLGIKVAELTGDSRLSRKQID
ETQVLVSTPEKWDITTRNSNNLAIVELVRLLIIDEIHLLHDDRGPVLESIVARTFWASKY
GQEYPRIIGLSATLPNYEDVGRFLRVPKEGLFYFDSSFRPCPLSQQFCGIKERNSLKKLK
AMNDACYEKVLESINEGNQIIVFVHSRKETSRTATWLKNKFAEENITHKLTKNDAGSKQI
LKTEAANVLDPSLRKLIESGIGTHHAGLTRSDRSLSEDLFADGLLQVLVCTATLAWGVNL
PAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIIITDQSNVQYYLS
VLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRMLASPMLYKVPDI
SSDGQLKKFRESLVHSALCILKEQELVLYDAENDVIEATDLGNIASSFYINHASMDVYNR
ELDEHTTQIDLFRIFSMSEEFKYVSVRYEEKRELKQLLEKAPIPIREDIDDPLAKVNVLL
QSYFSQLKFEGFALNSDIVFIHQNAGRLLRAMFEICLKRGWGHPTRMLLNLCKSATTKMW
PTNCPLRQFKTCPVEVIKRLEASTVPWGDYLQLETPAEVGRAIRSEKYGKQVYDLLKRFP
KMSVTCNAQPITRSVMRFNIEIIADWIWDMNVHGSLEPFLLMLEDTDGDSILYYDVLFIT
PDIVGHEFTLSFTYELKQHNQNNLPPNFFLTLISENWWHSEFEIPVSFNGFKLPKKFPPP
TPLLENISISTSELGNDDFSEVFEFKTFNKIQSQVFESLYNSNDSVFVGSGKGTGKTAMA
ELALLNHWRQNKGRAVYINPSGEKIDFLLSDWNKRFSHLAGGKIINKLGNDPSLNLKLLA
KSHVLLATPVQFELLSRRWRQRKNIQSLELMIYDDAHEISQGVYGAVYETLISRMIFIAT
QLEKKIRFVCLSNCLANARDFGEWAGMTKSNIYNFSPSERIEPLEINIQSFKDVEHISFN
FSMLQMAFEASAAAAGNRNSSSVFLPSRKDCMEVASAFMKFSKAIEWDMLNVEEEQIVPY
IEKLTDGHLRAPLKHGVGILYKGMASNDERIVKRLYEYGAVSVLLISKDCSAFACKTDEV
IILGTNLYDGAEHKYMPYTINELLEMVGLASGNDSMAGKVLILTSHNMKAYYKKFLIEPL
PTESYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGIS
VFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIISTLSNGLIASHYGVSF
FTIQSFVSSLSNTSTLKNMLYVLSTAVEFESVPLRKGDRALLVKLSKRLPLRFPEHTSSG
SVSFKVFLLLQAYFSRLELPVDFQNDLKDILEKVVPLINVVVDILSANGYLNATTAMDLA
QMLIQGVWDVDNPLRQIPHFNNKILEKCKEINVETVYDIMALEDEERDEILTLTDSQLAQ
VAAFVNNYPNVELTYSLNNSDSLISGVKQKITIQLTRDVEPENLQVTSEKYPFDKLESWW
LVLGEVSKKELYAIKKVTLNKETQQYELEFDTPTSGKHNLTIWCVCDSYLDADKELSFEI
NVK
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcatgaaacgaaggataaggccaaaaaaattagagaaatttatcgttatgat
gagatgtccaataaggtgttgaaagttgataaacgctttatgaataccagccaaaatcct
caaagggatgcggaaatatcacaaccaaaatccatgagtggtagaattagtgctaaggat
atgggacagggcctgtgcaataacattaataaaggactaaaagaaaatgatgtagccgtt
gaaaaaactggaaagagcgcatcattgaaaaaaattcagcagcataacaccattttgaat
tcttcctccgatttcaggttacattattatccaaaggatccctcaaatgtcgaaacttac
gagcagattttgcagtgggttacagaagttttaggcaatgatataccccatgatcttatt
attggaactgctgatatattcatcagacaattgaaagaaaatgaggaaaatgaggatggt
aatattgaagagcgaaaggaaaagatccagcatgagctaggcatcaatatagactccctg
aagtttaacgaattagttaaacttatgaaaaacattaccgattatgaaacacatcctgac
aatagcaataaacaagcagtagcaattcttgccgatgatgaaaaatcagatgaagaagaa
gtaacagaaatgtccaacaatgctaatgttcttgggggagaaatcaatgataatgaagat
gatgatgaggaatatgattacaatgacgttgaagtcaattctaaaaaaaaaaacaagagg
gcattgccaaacattgaaaacgatataattaaactctccgatagtaaaacaagtaatatc
gagagcgttccgatatactcaatcgatgaattttttttgcagagaaaacttcggtcagag
cttggttacaaggatacctctgtaatacaagacctgtcagaaaaaattttgaatgatatt
gaaacacttgagcataatccagtagcgttggagcagaagttggttgatctgcttaaattc
gagaatatatcactggctgaatttattctcaagaatagatctacaattttttggggcata
cgactggcgaagagcacagagaatgaaataccgaacttaatagagaaaatggttgcaaaa
ggtttgaatgatcttgtggaacagtataaatttagagaaactacacactcaaagcgtgaa
ctcgattccggtgacgaccagccacagtcttcggaagcaaaaagaacaaaattcagtaat
ccagcaataccgcccgtcatagatttggaaaagattaaattcgacgaaagttctaaatta
atgaccgtgacaaaagtatccctaccggaaggatcattcaaaagggtgaaaccacaatat
gacgaaatacatattccagctcctagcaaacctgttattgattatgagttgaaagaaatt
acttctctaccagattggtgtcaggaggcgtttccttcatcggaaacaacgtccttaaac
cctatacaatcaaaggtttttcacgcagcatttgaaggtgattcaaacatgctaatatgt
gcacccactggttcaggtaagacgaatatcgcgttattgacggtattgaaagccttatcc
catcattataacccgaaaactaagaaattaaacctttctgcatttaaaattgtttatata
gcacccttgaaagccttagtacaggaacaagtccgagaatttcaaaggaggttggctttt
ctaggtataaaagtcgctgaattgactggtgattctaggcttagtagaaagcaaattgac
gagacgcaggttttggtgtctacgccagagaaatgggacataactactagaaattcaaat
aatttggccatcgtagaacttgttcgtttgttgattatagatgaaatacatttgttacat
gatgacaggggaccagtattggaaagcatcgtggctaggacattttgggcttccaaatat
ggccaggaataccccagaataataggcctttctgccaccttaccaaattatgaggatgtc
ggtaggtttttaagagttccgaaggaaggattgttttattttgactcctcatttagaccg
tgtcctctatctcaacagttttgtggcattaaggaacggaactccttgaaaaagctgaag
gctatgaatgatgcttgttatgaaaaggtattggaatccatcaatgaaggtaatcaaata
atcgtgtttgttcattctcgaaaagaaacatcacgaacagcaacatggttgaaaaataaa
tttgctgaagagaacattactcataaattaaccaaaaatgatgcaggatcgaagcagatt
ttaaagacagaagcagccaacgtactcgatccaagtctacgaaagttgattgaaagcggt
atagggacgcatcacgcagggctgaccagaagtgacagatccttatctgaagatttattt
gcagacgggttgttgcaagtattggtatgcactgcgacgttagcatggggtgttaatcta
cctgctcatacagtgattataaaaggaacagatgtctattcacctgaaaaggggtcctgg
gaacaactttctccacaagatgtacttcaaatgttaggtagagcaggcagaccgagatat
gacacatttggcgagggtattataataacagaccaatcgaatgttcaatattatctctcg
gttttaaatcaacaattaccaatagaatcgcaatttgtttcaaaattagttgacaactta
aatgcagaagttgtcgcgggtaacattaagtgcaggaatgatgctgtgaattggttggcg
tatacttacctatatgtcagaatgttagcttcccctatgctttacaaagtacctgatatt
tcaagtgatgggcaattgaaaaagtttagagaaagcttagtccattcggccctatgcatt
ttaaaagaacaagagttggtgttatatgatgctgaaaatgatgtaattgaggcgaccgat
ctaggaaatatagcgtcgtcattttacataaatcatgcttccatggatgtttacaataga
gagttagatgaacatacaactcagattgatctttttagaatattctcaatgtcggaagag
tttaagtacgtatcggtgagatatgaagagaaaagagaactaaaacaacttctagagaaa
gcacccattcctatcagagaagatattgatgatcctttagcaaaagtgaatgtactactg
cagtcttatttttcccagctaaagttcgaaggttttgcacttaattctgatatagtgttt
attcaccaaaatgctggtaggttattgcgtgctatgtttgaaatatgcttgaagagagga
tggggacatcccacacggatgttgttaaatctttgcaaatctgccacaactaaaatgtgg
ccaacaaactgtcctttaagacagtttaaaacatgccctgtcgaagtgattaaaaggctg
gaagcctctacagtaccgtggggagattatctacagctagaaacacctgccgaagttggt
cgtgcaatcagatctgaaaaatatggaaaacaggtttacgatttattgaaaagatttccc
aaaatgtccgtaacatgcaacgctcagccaattacccgtagcgttatgaggttcaacatt
gaaataatagccgactggatatgggatatgaatgtacacggttcccttgaaccttttttg
ctcatgctagaagacactgatggtgattcaatactttattatgacgtactattcatcact
ccagatatagttggtcatgaatttaccttatcctttacttatgagttaaagcagcacaat
caaaataacttaccacctaatttcttccttactttgatatcagaaaattggtggcacagt
gaattcgagattccagtttccttcaatggatttaaacttccgaaaaaatttcctcctcct
actccccttctggagaatattagtatttcaacatcagagcttggcaatgatgatttttcc
gaagtatttgaatttaaaactttcaacaagattcagagccaggtcttcgagtctctctac
aattcgaatgactcggtctttgtaggttcaggaaagggcacaggtaaaacagctatggct
gaattagcactgttaaatcattggagacagaataaaggaagagcggtttatatcaatccg
tctggggaaaaaattgattttttgctatctgattggaataaaaggttctctcatcttgct
ggtggtaagataataaataagctaggaaatgatccttcactaaatttaaaattattagca
aaaagccatgttctcttggctacccccgtgcaatttgagcttttgtcacgtcgttggaga
caaaggaagaacatccaaagtttagaattaatgatatatgatgacgctcatgagattagc
caaggtgtttacggtgctgtgtatgaaacgctaatttctagaatgatatttatagcaacc
caacttgaaaagaaaattcgatttgtttgcctttcgaactgtttggcaaatgctcgtgat
tttggtgaatgggctggtatgacgaagtcaaacatctacaacttttctccaagcgaaaga
attgagcctcttgaaattaatattcagtcatttaaagatgttgagcacatatcattcaat
ttttcgatgcttcaaatggcatttgaagcatctgctgctgcagcgggaaatcgtaattcc
agttcggtgttcttaccatctagaaaggattgtatggaagttgcgtctgcatttatgaag
ttttcaaaagcaattgaatgggatatgttgaacgttgaagaagagcaaattgtaccatac
attgaaaagttaacagatggtcatctaagagcacctttaaaacacggtgttggtattttg
tataaggggatggcatcaaatgatgaaagaattgtgaaaaggttatacgaatatggtgcg
gtatcggttttactcatttctaaggattgttctgcattcgcttgtaaaactgatgaagtg
attattttaggaaccaacctttatgatggtgcagagcataaatatatgccatataccata
aatgaacttctagaaatggtgggactagctagtggtaacgattcaatggcaggcaaggtt
ttaattttgacaagtcacaacatgaaggcctactacaaaaaattcttaattgagcctttg
cctactgagagttacctacagtatattattcatgatactctgaacaacgagatagcaaat
tctattatacaaagcaaacaagattgtgttgactggtttacatattcgtatttctatcgt
cgtatccatgtgaatccaagctattatggcgtaagggatacgtctccacatggaatttca
gtttttttgagtaatttagttgaaacttgtttgaatgacttagttgaatcatccttcatt
gaaattgacgatacagaagctgaagtaaccgcagaagttaatggaggagatgatgaagca
actgaaatcatttctaccttgagcaacgggctaattgcttctcactatggcgtatcattt
tttactattcagtcattcgtttcttctttatcgaatacgtcaacgctcaaaaacatgctg
tatgttctttcaacagcagtagaattcgaaagtgttccactcagaaaaggagacagagca
ttacttgtcaaattaagtaaaagactaccattgagattccctgaacacacctcttctggt
tcggtgagctttaaagttttcttattgttacaagcatatttttcacgtcttgaattacct
gtcgactttcaaaatgatttaaaagacattctagaaaaggttgttccactaattaacgta
gtggttgatatcctttcagcaaacgggtatttgaatgctactaccgccatggatttggcg
cagatgttgattcagggtgtatgggacgttgataatccgttgagacagattccacacttc
aacaacaaaattttggaaaaatgtaaagaaattaacgtcgagacggtctatgatataatg
gcccttgaggatgaagagagggatgaaattttaacgcttactgattcacagcttgcgcag
gtcgccgcgtttgttaacaattaccccaacgttgaacttacttattcgttgaataattct
gattcgttaatttcaggtgtaaaacagaaaattaccattcaattgacaagagatgttgaa
cctgagaacttacaagtaacatctgaaaagtatccgtttgataagctagaaagttggtgg
ttggttttaggtgaagtatctaaaaaagagctttatgcgatcaagaaagttactttaaat
aaagagactcagcaatatgaattggaatttgacactccgacatctggtaaacataactta
acaatttggtgtgtctgtgattcatatcttgacgcagataaagagttgtcctttgaaata
aatgtgaaataa
DBGET
integrated database retrieval system
