Saccharomyces cerevisiae (budding yeast): YER013W
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Entry
YER013W CDS
T00005
Symbol
PRP22
Name
(RefSeq) DEAH-box ATP-dependent RNA helicase PRP22
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
sce
Saccharomyces cerevisiae (budding yeast)
Pathway
sce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
YER013W (PRP22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sce03041
]
YER013W (PRP22)
Enzymes [BR:
sce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
YER013W (PRP22)
Spliceosome [BR:
sce03041
]
Complex C
Other components
Step II factors
YER013W (PRP22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
PWI
nSTAND3
ABC_tran
AAA_30
AAA_19
SRP54
Acyl-CoA_ox_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
856732
NCBI-ProteinID:
NP_010929
SGD:
S000000815
UniProt:
P24384
Structure
PDB
LinkDB
All DBs
Position
V:178841..182278
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AA seq
1145 aa
AA seq
DB search
MSDISKLIGAIVGSDDPVIIEFVLNIINKSGNLQEFIRNIQKLDAGISYEDSIKMYNAFL
GKQEEEKVRNKVKSSPLSQKINQVLKDDVNLDDPVVTEFVLSILNKSKSITEFQEQLNLM
QSGLDNETIFKIYQIASPPVMKEEVSVLPSTKIPAKIEAKIEEEVQKIESLDPSPVLHKV
YEGKVRNITTFGCFVQIFGTRMKNCDGLVHISEMSDQRTLDPHDVVRQGQHIFVEVIKIQ
NNGKISLSMKNIDQHSGEIRKRNTESVEDRGRSNDAHTSRNMKNKIKRRALTSPERWEIR
QLIASGAASIDDYPELKDEIPINTSYLTAKRDDGSIVNGNTEKVDSKLEEQQRDETDEID
VELNTDDGPKFLKDQQVKGAKKYEMPKITKVPRGFMNRSAINGSNAIRDHREEKLRKKRE
IEQQIRKQQSFDDPTKNKKDSRNEIQMLKNQLIVTEWEKNRMNESISYGKRTSLPISAQR
QTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVA
AVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVI
MLDEAHERTVATDVLFALLKKAAIKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTF
PVEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGD
SIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKI
NIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQR
QNLSHTILMLKAMGINDLLKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSL
FPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHPYGDH
LTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCHSDPDL
IRKTFVSGFFMNAAKRDSQVGYKTINGGTEVGIHPSSSLYGKEYEYVMYHSIVLTSREYM
SQVTSIEPQWLLEVAPHFYKAGDAESQSRKKAKIIPLHNKFAKDQNSWRLSSIRQSRERA
LGIKR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatatatcgaaactcataggagctattgtgggatctgatgaccccgttatcatt
gaatttgtgctgaatatcataaataaatccggcaatttacaagagtttatacgaaatatt
caaaaattggatgccggtatatcctacgaagacagtattaagatgtataatgcattttta
ggaaagcaggaagaagaaaaggtacgaaataaagttaaaagttcaccgttaagtcaaaaa
attaatcaggtactgaaagatgacgttaatttggacgaccctgttgtgactgaattcgtc
ctgagcattttgaataaatctaaatcaataactgagttccaggaacaactgaacttgatg
caaagcggactcgataatgaaacaattttcaagatatatcaaattgcatcaccaccagta
atgaaagaagaagtctcagttcttccaagcaccaagataccagcaaagatagaagcaaag
attgaagaagaggtacaaaaaatagaaagtttagaccccagccctgtccttcacaaagtt
tatgaaggtaaagtgagaaacataactacttttgggtgtttcgtccaaatttttgggacg
cgaatgaagaattgtgatggcttagttcatatttcagaaatgtcagaccaaagaacatta
gatccacatgatgtggtgagacaaggccaacatatctttgtcgaagtgataaaaatacaa
aataatggaaaaatatcgctctccatgaaaaatattgatcaacatagtggagaaatccgg
aaaagaaatactgaaagtgtcgaagatagaggtaggtccaacgatgctcatacaagcaga
aatatgaaaaacaaaattaaaaggcgtgctttgacttcaccagaaagatgggaaattcgc
caactaattgccagcggtgctgcttccatcgatgactatcctgaattgaaggatgaaata
cccataaatacttcctatttgaccgcgaaaagagatgacggcagtatcgttaacggtaat
acagagaaagtggactcaaaattggaagaacaacaacgagacgagacggatgaaattgat
gtcgagctgaatacagatgatgggcccaaatttttaaaggatcagcaagtcaagggggcc
aagaaatatgaaatgcctaaaattacaaaagtcccgagaggatttatgaatcgttcagca
atcaacggctctaatgcaatacgagatcatagagaagaaaagttaaggaaaaaaagagag
attgaacaacagattaggaaacaacagtcgtttgatgatcctacgaaaaacaaaaaagat
tccaggaacgaaattcaaatgttgaaaaaccagctgattgttactgaatgggaaaaaaat
agaatgaatgaatctatctcgtatggcaaaagaacttccttaccaatcagtgcacagcgt
caaactttgcctgtatacgcgatgaggtctgaattgatacaggctgtgcgtgacaatcaa
tttctggtcattgttggtgagacaggttcgggtaaaaccactcaaattactcagtattta
gatgaagaagggtttagtaactatgggatgatcggatgtacccaacctcgtagggttgcc
gctgtatccgttgctaaaagagtggctgaagaagttggctgcaaagttggccatgacgtt
ggctataccattagatttgaagatgttactggcccagataccagaataaaatatatgact
gatggtatgttacagagagaggcgttgttagatcccgagatgtcaaaatattcagttatc
atgttagatgaagctcacgaaagaactgtggcaactgatgttttatttgcgttgttaaag
aaagcggctattaaaaggccagaattaaaagtaatagttacatcggctactttgaactct
gctaaattttctgagtactttttaaattgtccgattatcaatatacctggtaaaactttt
cccgtggaagtactctactcacagacgccccaaatggattacatagaggcagctttggat
tgtgtaatagacatccatattaatgaaggcccaggcgatattttagtctttttgactgga
caggaagaaatagactcatgctgtgaaattttatatgatagggtgaaaactttaggtgac
agcatcggcgaattactgattttgcccgtttattctgctttgccaagtgaaatccaatcg
aaaatttttgaacccactccaaagggcagtcgaaaagtcgtatttgccacaaatattgcg
gaaacttcaatcactattgatggaatttattatgtcgtggaccctggatttgcaaaaatc
aacatttataatgcaagagcaggtatcgagcagttgatagtgtctccaatctctcaggca
caggcaaatcaaagaaaaggtagagctggaagaacaggccctggaaaatgctatcgactt
tatacagaatccgcattttacaatgaaatgttagaaaacacggttccagaaattcaaagg
cagaatctttctcatactattttgatgctaaaggccatgggaattaatgatttattgaaa
tttgacttcatggatccccctcccaaaaatttaatgcttaacgcactgacagaattatac
cacctgcagtcactagatgacgagggaaaactaacaaatttaggtaaagagatgtcctta
tttccaatggatcccactctatcacgctctttattgtcatctgttgataatcagtgctcg
gatgaaattgttactataatctcaatgttgtcagtacagaacgttttttatcgtccaaaa
gataggcaattggaagcagatagcaagaaggcaaagtttcatcatccatacggtgaccat
ttaacattattgaacgtttatactagatggcagcaggcaaattactcggagcagtattgc
aaaacaaactttctgcattttagacatttgaaaagagcaagagatgttaaaagccaaatt
agcatgatatttaaaaagataggcttaaagttaataagctgtcatagtgatcctgattta
attcgtaaaactttcgtgtcagggttcttcatgaacgctgctaagcgagactcacaggta
ggttataaaaccatcaatggtggtacagaggttggaatacatccctcgagttcattgtac
ggaaaagagtatgaatacgtaatgtatcatagtatcgtattaactagccgggaatacatg
tcgcaggtaacatccattgagccccaatggcttctcgaagtagcgcctcatttttataaa
gctggagatgctgaaagccagtctaggaagaaagcgaaaatcattcctttgcataacaag
tttgccaaggatcaaaattcatggagactaagctcaataaggcagtcaagggaaagggca
ttaggtatcaagaggtaa
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integrated database retrieval system
