Detailed view for Rv3554

Basic information

TDR Targets ID: 981167
Mycobacterium tuberculosis, Possible electron transfer protein FdxB

Source Database / ID:  Tuberculist 

pI: 6.9289 | Length (AA): 685 | MW (Da): 76534 | Paralog Number: 0

Signal peptide: N | GPI Anchor: | Predicted trans-membrane segments: 4

Druggability Group : DG2

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

Gene Ontology

Mouse over links to read term descriptions.
GO:0051536   iron-sulfur cluster binding  
GO:0016491   oxidoreductase activity  
GO:0009055   electron carrier activity  
GO:0006629   lipid metabolic process  
GO:0055114   oxidation reduction  

Metabolic Pathways

This gene is not mapped to any metabolic pathway in KEGG.

Structural information

Modbase 3D models:

There are 8 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
206 589 4g1v (A) 13 395 18.00 0 1 0.739384 -0.18
333 682 2pia (A) 1 320 27.00 0 1 0.767949 0.07
344 579 5yly (A) 608 863 23.00 0 1 0.631526 -0.63
437 570 3lyu (A) 88 213 20.00 0 0.81 0.52042 -1.3
448 519 1qd7 (I) 6 68 33.00 0.8 0.44 0.140509 1.91
597 684 1awd (A) 2 89 27.00 0 1 0.569267 -0.94
629 674 4n58 (A) 35 79 47.00 0.007 0.98 0.521553 0.46
632 679 3zyy (X) 38 86 31.00 0.027 0.74 0.387473 0.39

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

No structure availble in the PDB for this protein


No expression data available for this gene


Ortholog group members (OG5_169583)

Species Accession Gene Product
Mycobacterium tuberculosis Rv3554   Possible electron transfer protein FdxB
Mycobacterium ulcerans MUL_4117   electron transfer protein FdxB
Mycobacterium ulcerans MUL_0363   electron transfer protein


No essentiality data collected for this gene and/or its orthologs.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Non orthologous druggable targets
By sequence similarity to non orthologous druggable targets
No additional associated druggable targets

Obtained from network model
No druggable targets predicted through repurposing network model


Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

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Gene identifier Rv3554 (Mycobacterium tuberculosis), Possible electron transfer protein FdxB
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