Detailed information for compound 1879806

Basic information

Technical information
  • TDR Targets ID: 1879806
  • Name: N-[(2-nitrophenyl)methylideneamino]-4,5-dihyd ro-1H-imidazol-2-amine
  • MW: 233.227 | Formula: C10H11N5O2
  • H donors: 2 H acceptors: 2 LogP: 0.51 Rotable bonds: 4
    Rule of 5 violations (Lipinski): 1
  • SMILES: [O-][N+](=O)c1ccccc1/C=N/NC1=NCCN1
  • InChi: 1S/C10H11N5O2/c16-15(17)9-4-2-1-3-8(9)7-13-14-10-11-5-6-12-10/h1-4,7H,5-6H2,(H2,11,12,14)/b13-7+
  • InChiKey: KVTJKIWNHJRDBI-NTUHNPAUSA-N  


Substructure search Similarity search

Network

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Synonyms

  • N-[(2-nitrophenyl)methyleneamino]-4,5-dihydro-1H-imidazol-2-amine
  • 4,5-dihydro-1H-imidazol-2-yl-[(2-nitrobenzylidene)amino]amine
  • 2-nitrobenzaldehyde 4,5-dihydro-1H-imidazol-2-ylhydrazone
  • MLS001180885
  • SMR000476466
  • AJ-264/36744007

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens APOBEC3A and APOBEC3B deletion hybrid Starlite/ChEMBL No references
Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G Starlite/ChEMBL No references

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Loa Loa (eye worm) ribonucleoside-diphosphate reductase large subunit 0.2062 1 1
Trypanosoma cruzi ribonucleoside-diphosphate reductase large chain, putative 0.2062 1 1
Plasmodium falciparum ribonucleoside-diphosphate reductase large subunit, putative 0.2062 1 0.5
Wolbachia endosymbiont of Brugia malayi ribonucleotide-diphosphate reductase subunit alpha 0.1786 0.8372 0.5
Leishmania major ribonucleoside-diphosphate reductase large chain, putative 0.2062 1 0.5
Schistosoma mansoni ribonucleoside-diphosphate reductase alpha subunit 0.2062 1 0.5
Treponema pallidum ribonucleotide-diphosphate reductase subunit alpha 0.2062 1 0.5
Mycobacterium tuberculosis Ribonucleoside-diphosphate reductase (alpha chain) NrdE (ribonucleotide reductase small subunit) (R1F protein) 0.1786 0.8372 1
Mycobacterium ulcerans ribonucleotide-diphosphate reductase subunit alpha 0.1786 0.8372 0.5
Onchocerca volvulus 0.0365 0 0.5
Toxoplasma gondii ribonucleoside-diphosphate reductase large chain 0.2062 1 0.5
Mycobacterium leprae RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE (ALPHA CHAIN) NRDE (RIBONUCLEOTIDE REDUCTASE SMALL SUBUNIT) (R1F PROTEIN) 0.1786 0.8372 0.5
Trichomonas vaginalis ribonucleoside-diphosphate reductase alpha chain, putative 0.1786 0.8372 0.5
Trypanosoma brucei ribonucleoside-diphosphate reductase large chain 0.2062 1 0.5
Chlamydia trachomatis ribonucleoside-diphosphate reductase subunit alpha 0.2062 1 0.5
Echinococcus granulosus ribonucleoside diphosphate reductase large 0.2062 1 0.5
Echinococcus multilocularis ribonucleoside diphosphate reductase large 0.2062 1 0.5
Plasmodium vivax ribonucleoside-diphosphate reductase large chain, putative 0.2062 1 0.5

Activities

Activity type Activity value Assay description Source Reference
IC50 (functional) = 5.96 uM PUBCHEM_BIOASSAY: Dose Response confirmation of small molecule APOBEC3A DNA Deaminase Inhibitors via a fluorescence-based single-stranded DNA deaminase assay. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID493011, AID493024] ChEMBL. No reference
IC50 (functional) = 6.95 uM PUBCHEM_BIOASSAY: Dose Response confirmation of APOBEC3A DNA Deaminase Inhibitors via a A3G counterscreen. (Class of assay: confirmatory) [Related pubchem assays (depositor defined):AID493011, AID493024] ChEMBL. No reference

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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