Detailed information for compound 1963009

Basic information

Technical information
  • Name: Unnamed compound
  • MW: 593.868 | Formula: C27H17ClF9NO2
  • H donors: 0 H acceptors: 1 LogP: 8.42 Rotable bonds: 6
    Rule of 5 violations (Lipinski): 2
  • SMILES: O=C1O[C@@H]([C@H]2N1[C@@H](CC2)c1cc(ccc1c1ccccc1Cl)C(F)(F)F)c1cc(cc(c1)C(F)(F)F)C(F)(F)F
  • InChi: 1S/C27H17ClF9NO2/c28-20-4-2-1-3-18(20)17-6-5-14(25(29,30)31)12-19(17)21-7-8-22-23(40-24(39)38(21)22)13-9-15(26(32,33)34)11-16(10-13)27(35,36)37/h1-6,9-12,21-23H,7-8H2/t21-,22-,23+/m0/s1
  • InChiKey: KJOYXWZTANBIIP-RJGXRXQPSA-N  


Substructure search Similarity search

Network

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Synonyms

No synonyms found for this compound

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Homo sapiens cholesteryl ester transfer protein, plasma Starlite/ChEMBL No references

Predicted pathogen targets for this compound

By orthology
No druggable targets predicted by orthology data
By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity
Obtained from network model

Ranking Plot

Putative Targets List

Species Potential target Raw Global Species
Echinococcus granulosus eukaryotic initiation factor 4A III 0.008 0.5 0.5
Trichomonas vaginalis DEAD box ATP-dependent RNA helicase, putative 0.008 0.5 0.5
Treponema pallidum ATP-dependent RNA helicase 0.008 0.5 0.5
Schistosoma mansoni DEAD box ATP-dependent RNA helicase 0.008 0.5 0.5
Onchocerca volvulus Eukaryotic initiation factor 4A homolog 0.008 0.5 0.5
Trypanosoma brucei Eukaryotic initiation factor 4A-1 0.008 0.5 0.5
Giardia lamblia Translation initiation factor eIF-4A, putative 0.008 0.5 0.5
Leishmania major eukaryotic initiation factor 4a, putative 0.008 0.5 0.5
Trichomonas vaginalis DEAD box ATP-dependent RNA helicase, putative 0.008 0.5 0.5
Plasmodium falciparum eukaryotic initiation factor 4A 0.008 0.5 0.5
Trypanosoma cruzi Eukaryotic initiation factor 4A-1 0.008 0.5 0.5
Echinococcus multilocularis eukaryotic initiation factor 4A 0.008 0.5 0.5
Leishmania major eukaryotic initiation factor 4a, putative 0.008 0.5 0.5
Echinococcus granulosus eukaryotic initiation factor 4A 0.008 0.5 0.5
Echinococcus multilocularis eukaryotic initiation factor 4A III 0.008 0.5 0.5
Trypanosoma cruzi Eukaryotic initiation factor 4A-1 0.008 0.5 0.5
Toxoplasma gondii eukaryotic initiation factor-4A, putative 0.008 0.5 0.5
Mycobacterium tuberculosis Probable cold-shock DeaD-box protein A homolog DeaD (ATP-dependent RNA helicase dead homolog) 0.008 0.5 0.5
Schistosoma mansoni DEAD box ATP-dependent RNA helicase 0.008 0.5 0.5
Plasmodium vivax RNA helicase-1, putative 0.008 0.5 0.5
Entamoeba histolytica DEAD/DEAH box helicase, putative 0.008 0.5 0.5
Loa Loa (eye worm) hypothetical protein 0.008 0.5 0.5
Trichomonas vaginalis DEAD box ATP-dependent RNA helicase, putative 0.008 0.5 0.5

Activities

Activity type Activity value Assay description Source Reference
IC50 (binding) = 452.8 nM BindingDB_Patents: Scintillation Proximity Assay (SPA). First, low density lipoprotein (LDL) (Meridian) was biotinylated by incubating LDL with biotin for 1 hour on ice, after which it was dialyzed to remove free biotin. Then compounds at varying concentrations were incubated with 15 nM CETP (reagent production group, In Vitro Pharmacology, MRL Rahway) and 50 ug/ml of the biotinylated LDL in 50 mM HEPES, 150 mM NaCl, pH 7.4, for 1 hour at 37° C. The reaction was started by adding 3H-cholesterol ester high density lipoprotein (HDL) (American Radiochemicals Corp) at a concentration of ~0.6 nM. The reaction proceeded for 2 hours at 37° C., after which time it was quenched by the addition of 12% acetic acid. PVT streptavadin-coated scintillation proximity beads, which had been brought to room temperature, were then added at a concentration of 4 mg/ml. The assay was then mixed and counted after one half hour in a Microbeta plate reader. ChEMBL. No reference

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

We have no manually annotated phenotypes for this drug. What does this mean? / Care to help?
In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

No literature references available for this target.

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