Detailed information for compound 9552

Basic information

Technical information
  • TDR Targets ID: 9552
  • Name: (2R)-2-aminopropanoic acid
  • MW: 89.0932 | Formula: C3H7NO2
  • H donors: 2 H acceptors: 2 LogP: -3 Rotable bonds: 1
    Rule of 5 violations (Lipinski): 1
  • SMILES: CC(C(=O)O)N
  • InChi: 1S/C3H7NO2/c1-2(4)3(5)6/h2H,4H2,1H3,(H,5,6)
  • InChiKey: QNAYBMKLOCPYGJ-UHFFFAOYSA-N  

Network

Hover on a compound node to display the structore

Synonyms

  • D-Alanine
  • 2-aminopropanoic acid
  • 2-azanylpropanoic acid
  • 2-aminopropionic acid
  • Alanine
  • chlorambucil-docosahexaenoic acid conjugate
  • polyalanine
  • 338-69-2
  • 56-41-7
  • 6898-94-8
  • 302-72-7
  • ()-2-Aminopropionic acid
  • 05150_FLUKA
  • ARONIS005074
  • LS-2384
  • (.+/-.)-Alanine
  • (+-)-2-Aminopropionic acid
  • (+-)-Alanine
  • (R,S)-Alanine
  • (RS)-2-Aminopropionsaeure
  • AI3-08908
  • DL-2-Aminopropionic acid
  • DL-alpha-Alanine
  • DL-alpha-Aminopropionic acid
  • EINECS 206-126-4
  • NSC 7602
  • Alanin
  • C01401
  • D(-)-.alpha.-Alanine
  • LS-15737
  • A7502_SIGMA
  • D-.alpha.-Alanine
  • NSC158286
  • CHEBI:16449
  • W381810_ALDRICH
  • (S)-Alanine
  • .alpha.-Alanine
  • .alpha.-Aminopropionic acid
  • Alanine, L-
  • L(+)-Alanine
  • L-.alpha.-Alanine
  • L-.alpha.-Aminopropionic acid
  • L-2-Aminopropanoic acid
  • NSC206315
  • Propanoic acid, 2-amino-
  • Propanoic acid, 2-amino-, (S)-
  • ST5213965
  • P9003_SIGMA
  • L-alpha-alanine
  • Alanine, DL-
  • D,L-Alanine
  • D-(-)-Alanine
  • DL-Alanine
  • NSC7602
  • dl-2-Aminopropanoic acid

Targets

Known targets for this compound

Species Target name Source Bibliographic reference
Mycobacterium tuberculosis Probable glutamine synthetase GlnA3 (glutamine synthase) (GS-I) Curated by TDR Targets References
Mycobacterium tuberculosis Probable glutamine synthetase GlnA2 (glutamine synthase) (GS-II) Curated by TDR Targets References
Mycobacterium leprae PROBABLE GLUTAMINE SYNTHETASE GLNA2 (GLUTAMINE SYNTHASE) (GS-II) Curated by TDR Targets References

Predicted pathogen targets for this compound

By orthology
Species Potential target Known druggable target/s Ortholog Group
Schistosoma mansoni glutamine synthetase bacteria Get druggable targets OG5_127086 All targets in OG5_127086
Neospora caninum Glutamine synthetase (EC 6.3.1.2), related Get druggable targets OG5_127086 All targets in OG5_127086
Schistosoma mansoni glutamine synthetase bacteria Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium leprae GLUTAMINE SYNTHETASE GLNA1 (GLUTAMINE SYNTHASE) (Glutamate--ammonia ligase 1) (GS-I) Get druggable targets OG5_127086 All targets in OG5_127086
Toxoplasma gondii glutamine synthetase, type I, putative Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium leprae PROBABLE GLUTAMINE SYNTHETASE GLNA2 (GLUTAMINE SYNTHASE) (GS-II) Get druggable targets OG5_127086 All targets in OG5_127086
Schistosoma japonicum expressed protein Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium ulcerans hypothetical protein Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium tuberculosis Probable glutamine synthetase GlnA4 (glutamine synthase) (GS-II) Get druggable targets OG5_127086 All targets in OG5_127086
Plasmodium vivax glutamine synthetase, putative Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium tuberculosis Probable glutamine synthetase GlnA2 (glutamine synthase) (GS-II) Get druggable targets OG5_127086 All targets in OG5_127086
Plasmodium falciparum glutamine synthetase, putative Get druggable targets OG5_127086 All targets in OG5_127086
Plasmodium berghei glutamine synthetase, putative Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium tuberculosis Conserved hypothetical protein Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium tuberculosis Glutamine synthetase GlnA1 (glutamine synthase) (GS-I) Get druggable targets OG5_127086 All targets in OG5_127086
Plasmodium yoelii glutamine synthetase, putative Get druggable targets OG5_127086 All targets in OG5_127086
Wolbachia endosymbiont of Brugia malayi glutamine synthetase Get druggable targets OG5_127086 All targets in OG5_127086
Plasmodium knowlesi glutamine synthetase, putative Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium tuberculosis Probable glutamine synthetase GlnA3 (glutamine synthase) (GS-I) Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium ulcerans glutamine synthetase GlnA1 Get druggable targets OG5_127086 All targets in OG5_127086
Schistosoma japonicum ko:K01915 glutamine synthetase [EC6.3.1.2], putative Get druggable targets OG5_127086 All targets in OG5_127086
Mycobacterium ulcerans glutamine synthetase Get druggable targets OG5_127086 All targets in OG5_127086
Schistosoma japonicum Glutamine synthetase, putative Get druggable targets OG5_127086 All targets in OG5_127086
Cryptosporidium hominis glutamine synthetase Get druggable targets OG5_127086 All targets in OG5_127086
Cryptosporidium parvum glutamate synthetase, possible bacterial origin, beta-grasp+glutamate synthase catalytic domain Get druggable targets OG5_127086 All targets in OG5_127086

By sequence similarity to non orthologous known druggable targets
No druggable targets predicted by sequence similarity

Obtained from network model

Ranking Plot


Putative Targets List


Species Potential target Raw Global Species

Activities

Activity type Activity value Assay description Source Reference
Activity (functional) = 13 % Antiinflammatory activity in mouse RAW264.7 cells assessed as inhibition of LPS-induced NO production at 6 uM by Griess method ChEMBL. 23324083
Drug uptake (ADMET) = 32 % Drug accumulation in Saccharomyces cerevisiae AD12345678 reenergized with glucose at pH 6.0 assessed as intracellular accumulation after 60 mins by fluorescamine staining ChEMBL. 18794383
Drug uptake (ADMET) = 32 % Drug accumulation in Saccharomyces cerevisiae ADCDR1 expressing Candida albicans CDR1 efflux pump reenergized with glucose at pH 6.0 assessed as intracellular accumulation after 60 mins by fluorescamine staining ChEMBL. 18794383
Drug uptake (ADMET) = 32 % Drug accumulation in Saccharomyces cerevisiae ADCDR2 expressing Candida albicans CDR2 efflux pump reenergized with glucose at pH 6.0 after 60 mins by fluorescamine staining ChEMBL. 18794383
Drug uptake (ADMET) = 3.33 nmol/min Drug uptake in Saccharomyces cerevisiae ADMDR1 expressing Candida albicans MDR1 efflux pump at 200 uM pretreated for 10 mins measured after 60 mins by fluorescamine staining ChEMBL. 18794383
Drug uptake (ADMET) = 3.51 nmol/min Drug uptake in Saccharomyces cerevisiae AD12345678 at 200 uM pretreated for 10 mins measured after 60 mins by fluorescamine staining ChEMBL. 18794383
Drug uptake (ADMET) = 4.16 nmol/min Drug uptake in Saccharomyces cerevisiae ADCDR1 expressing Candida albicans CDR1 efflux pump at 200 uM pretreated for 10 mins measured after 60 mins by fluorescamine staining ChEMBL. 18794383
Drug uptake (ADMET) = 4.35 nmol/min Drug uptake in Saccharomyces cerevisiae ADCDR2 expressing Candida albicans CDR2 efflux pump at 200 uM pretreated for 10 mins measured after 60 mins by fluorescamine staining ChEMBL. 18794383
Km (binding) = 14.2 mM Km value of the compound was determined for Alanine racemase from Pseudomonas aeruginosa ChEMBL. 3079831
krel (binding) = 1.04 Effect on rate of GTP hydrolysis in the GTP binding protein ras p21 ChEMBL. 9871712
Log S = 0.25 Aqueous solubility ChEMBL. 10866370
MIC (functional) = 4.5 uM Antibacterial activity against Escherichia coli ATCC 10536 after 18 hrs by broth dilution method ChEMBL. 23324083
MIC (functional) > 25 uM Antifungal activity against Cryptococcus neoformans after 72 hrs by NCCLS microbroth dilution method ChEMBL. 23324083
MIC (functional) > 25 uM Antifungal activity against Candida albicans after 48 hrs by NCCLS microbroth dilution method ChEMBL. 23324083

Phenotypes

Whole-cell/tissue/organism interactions

We have no records of whole-cell/tissue assays done with this compound What does this mean?

Many chemical entities in TDR Targets come from high-throughput screenings with whole cells or tissue samples, and not all assayed compounds have been tested against a single a single target protein, probably because they get ruled out during screening process. Even if these compounds may have not been of interest in the original screening, they may come as interesting leads for other screening assays. Furthermore, we may be able to propose drug-target associations using chemical similarities and network patterns.

Annotated phenotypes:

Affected Entity Phenotypic quality Occurs in Occurs at Evidence Observed in Targets
catalytic activity (GO:0003824) decreased (PATO:0000468) in vitro (MI:0492) inferred from specific protein inhibition (ECO:0000020) Mycobacterium tuberculosis 256476  
Annotator: crowther@u.washington.edu Comment: 2007-12-26 References: 12540549 16973920 7937767
growth (GO:0040007) decreased (PATO:0000468) inferred from in vitro culture assay (ECO:0000182) Mycobacterium tuberculosis 256476  
Annotator: crowther@u.washington.edu Comment: 2007-12-26 References: 12540549
catalytic activity (GO:0003824) decreased (PATO:0000468) in vitro (MI:0492) inferred from specific protein inhibition (ECO:0000020) Mycobacterium tuberculosis 6149  
Annotator: crowther@u.washington.edu Comment: 2007-12-26 References: 12540549 16973920 7937767
catalytic activity (GO:0003824) decreased (PATO:0000468) in vitro (MI:0492) inferred from specific protein inhibition (ECO:0000020) Mycobacterium tuberculosis 6150  
Annotator: crowther@u.washington.edu Comment: 2007-12-26 References: 12540549 16973920 7937767
growth (GO:0040007) decreased (PATO:0000468) inferred from in vitro culture assay (ECO:0000182) Mycobacterium tuberculosis 6149  
Annotator: crowther@u.washington.edu Comment: 2007-12-26 References: 12540549
growth (GO:0040007) decreased (PATO:0000468) inferred from in vitro culture assay (ECO:0000182) Mycobacterium tuberculosis 6150  
Annotator: crowther@u.washington.edu Comment: 2007-12-26 References: 12540549

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.
 
In any case, if you have information about papers containing relevant validation data for this target, please log in using your TDR Targets username and password and send them to us using the corresponding form in this page (only visible to registered users) or contact us.

External resources for this compound

Bibliographic References

206 literature references were collected for this gene.

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