Detailed view for Smp_175120.2

Basic information

TDR Targets ID: 288822
Schistosoma mansoni, hypothetical protein
Source Database / ID:  GeneDB

pI: 8.5297 | Length (AA): 786 | MW (Da): 90492 | Paralog Number: 1

Signal peptide: N | GPI Anchor: N | Predicted trans-membrane segments: 1

Druggability Group : DG1

Targets have been classified into druggability groups (DG) according to their druggability score in network driven prioritizations. DGs range from 1 to 5; the higher the group number, the higher the chance of the target to be druggable

Pfam domains

No Pfam domain information for this protein.

Gene Ontology

Mouse over links to read term descriptions.
No GO information for this protein.

Structural information

Modbase 3D models:

There are 4 models calculated for this protein. More info on these models, including the models themselves is available at: Modbase

Target Beg Target End Template Template Beg Template End Identity Evalue Model Score MPQS zDope
172 503 2de0 (X) 174 480 36.00 0 1 0.762192 -0.01
490 766 2de0 (X) 278 562 43.00 0 1 0.812017 -0.07
720 766 2kbt (A) 796 841 20.00 0.45 0.03 0.146196 0.26
721 758 1x6b (A) 30 66 22.00 0.11 0.04 0.270746 -0.49

Help me make sense of these data.

Target Beg: first modeled residue
Target End: last modeled residue
Template: template structure used for modelling (PDB accession and chain)
Template Beg: first template residue in target-template alignment
Template End: last template residue in target-template alignment
Identity: sequence identity
Evalue: E value for target-template hit
Model Score: GA341 score (>0.7 for reliable model)
MPQS: ModPipe Quality Score (>1.1 for reliable model)
zDope: zDope Score (negative for reliable model)

A more detailed description of these scores is available at the Modbase Model Evaluation Help Pages, and in the papers referenced therein.

PDB Structures:

No structure availble in the PDB for this protein

Expression

No expression data available for this gene

Orthologs

Ortholog group members (OG5_132113)

Species Accession Gene Product
Brugia malayi Bm1_22280   Variant SH3 domain containing protein
Caenorhabditis elegans CELE_C10F3.6   Protein FUT-8
Drosophila melanogaster Dmel_CG2448   alpha1,6-fucosyltransferase
Echinococcus granulosus EgrG_000826900   alpha 16 fucosyltransferase
Echinococcus multilocularis EmuJ_000826900   alpha (1,6) fucosyltransferase
Homo sapiens ENSG00000033170   fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
Loa Loa (eye worm) LOAG_06726   variant SH3 domain-containing protein
Mus musculus ENSMUSG00000021065   fucosyltransferase 8
Schistosoma japonicum Sjp_0094930   Alpha-(1,6)-fucosyltransferase, putative
Schistosoma japonicum Sjp_0213240   ko:K00717 glycoprotein 6-alpha-L-fucosyltransferase [EC2.4.1.68], putative
Schistosoma mansoni Smp_175120.2   hypothetical protein
Schistosoma mansoni Smp_175120.1   hypothetical protein
Schmidtea mediterranea mk4.008212.01   Alpha-(1,6)-fucosyltransferase
Schmidtea mediterranea mk4.000060.13  
Schmidtea mediterranea mk4.008391.00  
Schmidtea mediterranea mk4.000060.15   Alpha-(1,6)-fucosyltransferase

Essentiality

No essentiality data collected for this gene and/or its orthologs.

Phenotypes and Validation (curated)

We have no manually annotated phenotypes for this target. What does this mean? / Care to help?

In TDR Targets, information about phenotypes that are caused by drugs, or by genetic manipulation of cells (e.g. gene knockouts or knockdowns) is manually curated from the literature. These descriptions help to describe the potential of the target for drug development. If no information is available for this gene or if the information is incomplete, this may mean that i) the papers containing this information either appeared after the curation effort for this organism was carried out or they were inadvertently missed by curators; or that ii) the curation effort for this organism has not yet started.

In any case, if you have information about papers containing relevant validation data for this target, please contact us.

Annotated validation

No validation data for this target

Associated compounds / Druggability

Known modulators for this target

No chemical compounds associated to this gene

Predicted associations

By orthology with druggable targets
Species Known druggable target Linked compounds Reference
Homo sapiens fucosyltransferase 8 (alpha (1,6) fucosyltransferase) Compounds References
By sequence similarity to non orthologous druggable targets
No additional associated druggable targets
Obtained from network model
No druggable targets predicted through repurposing network model

Assayability

Assay information

No assay information for this target.

Reagent availability

No reagent availability information for this target.

Bibliographic References

No literature references available for this target.

If you have references for this gene, please enter them in a user comment (below) or Contact us.

User comments

No user comments are available for this gene. Log in to add comments, or register.

Enter your comment

User ()
Gene identifier Smp_175120.2 (Schistosoma mansoni), hypothetical protein
Title for this comment
Comment